RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ARL13AQ5H913 290 aaPredicted RBP15.16■□□□□ 0.02
CLCN1-201ENST00000343257 ZNF362Q5T0B9 420 aaPredicted RBP15.16■□□□□ 0.02
CLCN1-201ENST00000343257 LRRC8EQ6NSJ5 796 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 SLC7A5P1Q8MH63 180 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 PGAM4Q8N0Y7 254 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 RP9Q8TA86 221 aaKnown RBP15.16■□□□□ 0.02
CLCN1-201ENST00000343257 CYGBQ8WWM9 190 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 HEPHQ9BQS7 1158 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 EFCAB1Q9HAE3 211 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 CXorf21Q9HAI6 301 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 A0A096LPK6 155 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 ACOT8O14734 319 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 GSTT2P0CG29 244 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 GSTT2BP0CG30 244 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 NR4A1P22736 598 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 PRDX6P30041 224 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 ASPAP45381 313 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 PMS2P3Q13401 168 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 RSBN1LQ6PCB5 846 aaPredicted RBP15.16■□□□□ 0.02
CLCN1-201ENST00000343257 OLFML1Q6UWY5 402 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 STRA8Q7Z7C7 330 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 CARM1Q86X55 608 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 BIRC8Q96P09 236 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 SNRNP25Q9BV90 132 aaKnown RBP15.16■□□□□ 0.02
CLCN1-201ENST00000343257 MAF1Q9H063 256 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 IL1RL2Q9HB29 575 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 C1orf232A0A0U1RR37 186 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 TRIM13O60858 407 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 STBD1O95210 358 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 ATG7O95352 703 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 ZNF182P17025 639 aaPredicted RBP15.16■□□□□ 0.02
CLCN1-201ENST00000343257 PDCD4Q53EL6 469 aaKnown RBP15.16■□□□□ 0.02
CLCN1-201ENST00000343257 GLRA4Q5JXX5 417 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 OSBPL11Q9BXB4 747 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 IGSF9Q9P2J2 1179 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 CORINQ9Y5Q5 1042 aa15.16■□□□□ 0.02
CLCN1-201ENST00000343257 CYP2F1P24903 491 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 PPARGP37231 505 aaPredicted RBP15.15■□□□□ 0.02
CLCN1-201ENST00000343257 GRIA4P48058 902 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 GJA8P48165 433 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 CSE1LP55060 971 aaKnown RBP15.15■□□□□ 0.02
CLCN1-201ENST00000343257 PSME3P61289 254 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 BAATQ14032 418 aaPredicted RBP15.15■□□□□ 0.02
CLCN1-201ENST00000343257 NR1D2Q14995 579 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 DUOXA2Q1HG44 320 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 HEATR6Q6AI08 1181 aaKnown RBP15.15■□□□□ 0.02
CLCN1-201ENST00000343257 FAM183BPQ6ZVS7 135 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 NAT16Q8N8M0 369 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 APBB2Q92870 758 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 VPS50Q96JG6 964 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 OMDQ99983 421 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 TASP1Q9H6P5 420 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 POLR1BQ9H9Y6 1135 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 FEM1BQ9UK73 627 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 PCDHGC3Q9UN70 934 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 G3V2L1 256 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 PHGDHO43175 533 aaKnown RBP15.15■□□□□ 0.02
CLCN1-201ENST00000343257 KCNH1O95259 989 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 TFEBP19484 476 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 TXNL4AP83876 142 aaKnown RBP15.15■□□□□ 0.02
CLCN1-201ENST00000343257 SLFN12LQ6IEE8 588 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 HMBOX1Q6NT76 420 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 FAM160B2Q86V87 743 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 RSPH1Q8WYR4 309 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 LRRC39Q96DD0 335 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 ZNF597Q96LX8 424 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 SACM1LQ9NTJ5 587 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 MTMR10Q9NXD2 777 aa15.15■□□□□ 0.02
CLCN1-201ENST00000343257 COPG1Q9Y678 874 aaKnown RBP15.15■□□□□ 0.02
CLCN1-201ENST00000343257 LDHAP00338 332 aaKnown RBP15.14■□□□□ 0.01
CLCN1-201ENST00000343257 CDH3P22223 829 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 NFKBIAP25963 317 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 ZNF143P52747 638 aaPredicted RBP15.14■□□□□ 0.01
CLCN1-201ENST00000343257 NIPAL4Q0D2K0 466 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 DGKDQ16760 1214 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 SNX29P2Q8IUI4 249 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 COLGALT1Q8NBJ5 622 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 ZNF669Q96BR6 464 aaPredicted RBP15.14■□□□□ 0.01
CLCN1-201ENST00000343257 FBXL20Q96IG2 436 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 APOL2Q9BQE5 337 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 NEURL2Q9BR09 285 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 PXMP2Q9NR77 195 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 CCDC167Q9P0B6 97 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 PADI4Q9UM07 663 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 COL5A3P25940 1745 aaPredicted RBP15.14■□□□□ 0.01
CLCN1-201ENST00000343257 SYNJ2BP-COX16A0A087WUM0 186 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 HDAC3O15379 428 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 PAPSS1O43252 624 aaPredicted RBP15.14■□□□□ 0.01
CLCN1-201ENST00000343257 ACTR2P61160 394 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 C6orf183Q5T699 404 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 CHSY3Q70JA7 882 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 RPS27LQ71UM5 84 aaKnown RBP15.14■□□□□ 0.01
CLCN1-201ENST00000343257 UTS2BQ765I0 119 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 LYSMD3Q7Z3D4 306 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 SLC4A11Q8NBS3 891 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 MCUQ8NE86 351 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 TBC1D15Q8TC07 691 aa15.14■□□□□ 0.01
CLCN1-201ENST00000343257 FNIP1Q8TF40 1166 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms