RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 GSTT2BP0CG30 244 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 DBTP11182 482 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 DARSP14868 501 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 PTH1RQ03431 593 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 RNF220Q5VTB9 566 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 RNF43Q68DV7 783 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 FMR1NBQ8N0W7 255 aaPredicted RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 SMYD1Q8NB12 490 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 CREB3L1Q96BA8 519 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MCEEQ96PE7 176 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 SLC25A23Q9BV35 468 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 WDR41Q9HAD4 459 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 SLC9A8Q9Y2E8 581 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ANKARQ7Z5J8 1434 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 NCKAP5LQ9HCH0 1330 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 DENND4AQ7Z401 1863 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 SLC22A1O15245 554 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A9O60656 530 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PMPCBO75439 489 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A6P19224 532 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A1P22309 533 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A4P22310 534 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A3P35503 534 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A5P35504 534 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ADD1P35611 737 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 JAK3P52333 1124 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PRKAA1Q13131 559 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MTF1Q14872 753 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 DLG2Q15700 870 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 FNBP1LQ5T0N5 605 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 SAPCD2Q86UD0 394 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MPP5Q8N3R9 675 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MTMR9Q96QG7 549 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MKNK1Q9BUB5 465 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 TRIM9Q9C026 710 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A7Q9HAW7 530 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A10Q9HAW8 530 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 UGT1A8Q9HAW9 530 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ANAPC2Q9UJX6 822 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ZNF225Q9UK10 706 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PROCP04070 461 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 RBP1P09455 135 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 GPD2P43304 727 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 CDH11P55287 796 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PFKFB3Q16875 520 aaPredicted RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 AAGABQ6PD74 315 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 THEMISQ8N1K5 641 aaPredicted RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 STOML3Q8TAV4 291 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ACTRT2Q8TDY3 377 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 TCTEX1D2Q8WW35 142 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 C18orf8Q96DM3 657 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 JPH4Q96JJ6 628 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ZNF471Q9BX82 626 aaPredicted RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 DHX35Q9H5Z1 703 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 EXD2Q9NVH0 621 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 CHORDC1Q9UHD1 332 aaPredicted RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 CDK12Q9NYV4 1490 aaPredicted RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 PLD2O14939 933 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 IFNA10P01566 189 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 IFNA4P05014 189 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ASNSP08243 561 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PRLRP16471 622 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ITGA2P17301 1181 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 VAMP7P51809 220 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MAPK10P53779 464 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ZNF844Q08AG5 666 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 COASYQ13057 564 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 MYBPC3Q14896 1274 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 WDR59Q6PJI9 974 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 DENND5BQ6ZUT9 1274 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 C1orf131Q8NDD1 294 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 MRPL9Q9BYD2 267 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 RSPH9Q9H1X1 276 aaPredicted RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 NDUFAF1Q9Y375 327 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 SPACA6W5XKT8 324 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 H3BQF6 201 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 KCNH1O95259 989 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 OMPP47874 163 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 IDH2P48735 452 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 CDK7P50613 346 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ARFIP1P53367 373 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ZNF394Q53GI3 561 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 TMEM53Q6P2H8 277 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 ARHGAP36Q6ZRI8 547 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 AMNQ9BXJ7 453 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 GGA3Q9NZ52 723 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 WWOXQ9NZC7 414 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 GLS2Q9UI32 602 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 CNOT7Q9UIV1 285 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 TSR3Q9UJK0 312 aaKnown RBP6.26□□□□□ -1.41
VCAN-203ENST00000343200 PADI4Q9UM07 663 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PCDHGA4Q9Y5G9 962 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 SAMD9Q5K651 1589 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 KMOO15229 486 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 GDF11O95390 407 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 PIGNO95427 931 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 LYNP07948 512 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 GADD45AP24522 165 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 GRIA3P42263 894 aa6.26□□□□□ -1.41
VCAN-203ENST00000343200 RBM34P42696 430 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms