RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 FASTKQ14296 549 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MFSD10Q14728 455 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RGS21Q2M5E4 152 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CACHD1Q5VU97 1274 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 WSCD1Q658N2 575 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MAP1SQ66K74 1059 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PPP4R4Q6NUP7 873 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TATDN1Q6P1N9 297 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RINLQ6ZS11 566 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CLNKQ7Z7G1 428 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 ALYREFQ86V81 257 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 ZDHHC17Q8IUH5 632 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 ULK2Q8IYT8 1036 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MICU2Q8IYU8 434 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RASGEF1CQ8N431 466 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 SPATA6LQ8N4H0 392 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PCDH20Q8N6Y1 951 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CAPSLQ8WWF8 208 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 SPOCK2Q92563 424 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RNF157Q96PX1 679 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TUBGCP5Q96RT8 1024 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 LGMNQ99538 433 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TBL1YQ9BQ87 522 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 NOL6Q9H6R4 1146 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 COPS7BQ9H9Q2 264 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MID1IP1Q9NPA3 183 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MAN1C1Q9NR34 630 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RGS18Q9NS28 235 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 VPS28Q9UK41 221 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 SNCAIPQ9Y6H5 919 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 C2orf71A6NGG8 1288 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CHADO15335 359 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 RHOCP08134 193 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PBLDP30039 288 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TM4SF1P30408 202 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MRPS22P82650 360 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CELF3Q5SZQ8 465 aaKnown RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TTC27Q6P3X3 843 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 P3H2Q8IVL5 708 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 SLC44A2Q8IWA5 706 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 CENPLQ8N0S6 344 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-202ENST00000343090 TSPAN14Q8NG11 270 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 ACTL7BQ9Y614 415 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 PIK3C2AO00443 1686 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 ROBO3Q96MS0 1386 aa8.21□□□□□ -1.1
UBE4B-202ENST00000343090 MAGEB16A2A368 324 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 SLCO1B7G3V0H7 640 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TRDMT1O14717 391 aaKnown RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 LYPLA1O75608 230 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 ZNF682O95780 498 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 ITGAVP06756 1048 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 GOT1P17174 413 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 CHRNB3Q05901 458 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 NR1D2Q14995 579 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 CYP51A1Q16850 503 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TRIM60Q495X7 471 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 PRAMEF19Q5SWL8 479 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 OTUD3Q5T2D3 398 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 UGT3A1Q6NUS8 523 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 SLC41A1Q8IVJ1 513 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TERB1Q8NA31 727 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 MFSD14AQ96MC6 490 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 PLEKHG4BQ96PX9 1271 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 GAD1Q99259 594 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 COLEC11Q9BWP8 271 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 CADM1Q9BY67 442 aaKnown RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 CLPBQ9H078 707 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 POPDC2Q9HBU9 364 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TBC1D13Q9NVG8 400 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TRNAU1APQ9NX07 287 aaKnown RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 SCN3BQ9NY72 215 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 PTTG2Q9NZH5 202 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 MAFO75444 373 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 CPSF4O95639 269 aaKnown RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 BCL10O95999 233 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 OR1E1P30953 314 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 RHOAP61586 193 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TRAF2Q12933 501 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 NR6A1Q15406 480 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TLK2Q86UE8 772 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 APBB2Q92870 758 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 SMARCD1Q96GM5 515 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 KCTD14Q9BQ13 255 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 NRDE2Q9H7Z3 1164 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 KCNK4Q9NYG8 393 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 CHKBQ9Y259 395 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TRMUO75648 421 aaKnown RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TBX4P57082 545 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 LRRC38Q5VT99 294 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 DNAJC14Q6Y2X3 702 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-202ENST00000343090 UNC5AQ6ZN44 842 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 RNF180Q86T96 592 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 TNS4Q8IZW8 715 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 LRRC57Q8N9N7 239 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 ZNF398Q8TD17 642 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 ZFYVE19Q96K21 471 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 EBF3Q9H4W6 596 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 SMPD4Q9NXE4 827 aa8.2□□□□□ -1.1
UBE4B-202ENST00000343090 VPS9D1Q9Y2B5 631 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms