RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FGF10O15520 208 aaPredicted RBP19.68■□□□□ 0.74
SYNE4-202ENST00000340477 AP5Z1O43299 807 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 LRP3O75074 770 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 NDUFS2O75306 463 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 DNTTP04053 509 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 H2AFZP0C0S5 128 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 EPHB2P29323 1055 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 OXTRP30559 389 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 NUMBP49757 651 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 STK19P49842 368 aaPredicted RBP19.68■□□□□ 0.74
SYNE4-202ENST00000340477 GALCP54803 685 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 TPI1P60174 286 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 RPL6Q02878 288 aaKnown RBP19.68■□□□□ 0.74
SYNE4-202ENST00000340477 GNA12Q03113 381 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 ZBTB16Q05516 673 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 TBX2Q13207 712 aaPredicted RBP19.68■□□□□ 0.74
SYNE4-202ENST00000340477 MAP7D1Q3KQU3 841 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 ACCSLQ4AC99 568 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 ERMARDQ5T6L9 678 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 H2AFVQ71UI9 128 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 METTL3Q86U44 580 aaKnown RBP19.68■□□□□ 0.74
SYNE4-202ENST00000340477 CCDC114Q96M63 670 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 SPON2Q9BUD6 331 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 MKRN2Q9H000 416 aaKnown RBP19.68■□□□□ 0.74
SYNE4-202ENST00000340477 DUSP15Q9H1R2 295 aaPredicted RBP19.68■□□□□ 0.74
SYNE4-202ENST00000340477 SLC6A17Q9H1V8 727 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 ATP13A1Q9HD20 1204 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 PRSS16Q9NQE7 514 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 TMEM248Q9NWD8 314 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 CTTNBP2NLQ9P2B4 639 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 PCSK1NQ9UHG2 260 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 OTOGLQ3ZCN5 2332 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 RALGAPA1Q6GYQ0 2036 aa19.68■□□□□ 0.74
SYNE4-202ENST00000340477 TTC34A8MYJ7 566 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 MYO1FO00160 1098 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 EPN2O95208 641 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 MIPP30301 263 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 PCK1P35558 622 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 DHPSP49366 369 aaPredicted RBP19.67■□□□□ 0.74
SYNE4-202ENST00000340477 VASPP50552 380 aaPredicted RBP19.67■□□□□ 0.74
SYNE4-202ENST00000340477 COPAP53621 1224 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 ZNF252P-AS1Q0IIN9 211 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 SPDYCQ5MJ68 293 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 PMS2CLQ68D20 193 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 IL31Q6EBC2 164 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 RETSATQ6NUM9 610 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 GAS2L3Q86XJ1 694 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 ZNF354CQ86Y25 554 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 PSTKQ8IV42 348 aaKnown RBP19.67■□□□□ 0.74
SYNE4-202ENST00000340477 ZNF564Q8TBZ8 553 aaPredicted RBP19.67■□□□□ 0.74
SYNE4-202ENST00000340477 ALG14Q96F25 216 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 MYO19Q96H55 970 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 TRIM7Q9C029 511 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 DHX35Q9H5Z1 703 aaKnown RBP19.67■□□□□ 0.74
SYNE4-202ENST00000340477 UVRAGQ9P2Y5 699 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 HPCAL4Q9UM19 191 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 PCDHGA5Q9Y5G8 931 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 OR51B4Q9Y5P0 310 aa19.67■□□□□ 0.74
SYNE4-202ENST00000340477 FAM72CH0Y354 149 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 CBX4O00257 560 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 DAPK3O43293 454 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 RAMP2O60895 175 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 SIN3BO75182 1162 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 LRCH4O75427 683 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 BCKDHBP21953 392 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 DPP6P42658 865 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 CLCN6P51797 869 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 ZNF135P52742 658 aaPredicted RBP19.66■□□□□ 0.74
SYNE4-202ENST00000340477 GEMIN4P57678 1058 aaKnown RBP19.66■□□□□ 0.74
SYNE4-202ENST00000340477 FAM72AQ5TYM5 149 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 FAM72DQ6L9T8 149 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 DSG4Q86SJ6 1040 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 FAM72BQ86X60 149 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 PYROXD2Q8N2H3 581 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 ATP11CQ8NB49 1132 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 OR52K2Q8NGK3 314 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 SNRNP25Q9BV90 132 aaKnown RBP19.66■□□□□ 0.74
SYNE4-202ENST00000340477 DNAI1Q9UI46 699 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 VPS51Q9UID3 782 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 SLCO3A1Q9UIG8 710 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 USP18Q9UMW8 372 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 SCML1Q9UN30 329 aa19.66■□□□□ 0.74
SYNE4-202ENST00000340477 FARP1Q9Y4F1 1045 aaPredicted RBP19.66■□□□□ 0.74
SYNE4-202ENST00000340477 USP34Q70CQ2 3546 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 CEP192Q8TEP8 1941 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 IGHV1OR15-9A0A0B4J2B8 117 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 A0A0D9SEW6 157 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 EEF2KO00418 725 aaKnown RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 FOXD2O60548 495 aaPredicted RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 TMEM253P0C7T8 217 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 CD6P30203 668 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 SSR1P43307 286 aaKnown RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 CREB5Q02930 508 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 ELAVL3Q14576 367 aaKnown RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 ASTE1Q2TB18 679 aaPredicted RBP19.65■□□□□ 0.74
SYNE4-202ENST00000340477 CYP2U1Q7Z449 544 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 NLRP14Q86W24 1093 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 SH2D3CQ8N5H7 860 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 NIPA2Q8N8Q9 360 aa19.65■□□□□ 0.74
SYNE4-202ENST00000340477 RTL3Q8N8U3 475 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms