RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 BPTFQ12830 3046 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 B2RBV5 119 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 LRPAP1P30533 357 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 TRIM68Q6AZZ1 485 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 TEX9Q8N6V9 391 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 ENDOVQ8N8Q3 282 aaKnown RBP16.69■□□□□ 0.26
LITAF-201ENST00000339430 WDR60Q8WVS4 1066 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 KCTD13Q8WZ19 329 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 EDEM1Q92611 657 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 SMOQ99835 787 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 TMEM106CQ9BVX2 250 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 ZNF358Q9NW07 568 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 TXNDC16Q9P2K2 825 aa16.69■□□□□ 0.26
LITAF-201ENST00000339430 TET1Q8NFU7 2136 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 GLRA3O75311 464 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 POLBP06746 335 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 ABCG1P45844 678 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 PTDSS1P48651 473 aaKnown RBP16.68■□□□□ 0.26
LITAF-201ENST00000339430 TPI1P60174 286 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 UBAP2LQ14157 1087 aaKnown RBP16.68■□□□□ 0.26
LITAF-201ENST00000339430 ACSBG2Q5FVE4 666 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 MBLAC2Q68D91 279 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 KYAT3Q6YP21 454 aaKnown RBP16.68■□□□□ 0.26
LITAF-201ENST00000339430 CYS1Q717R9 158 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 CMC1Q7Z7K0 106 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 NPWQ8N729 165 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 SEPT8Q92599 483 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 AZIN2Q96A70 460 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 PCED1BQ96HM7 432 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 ZNF778Q96MU6 729 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 GORASP1Q9BQQ3 440 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 THAP1Q9NVV9 213 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 GEMIN8Q9NWZ8 242 aaKnown RBP16.68■□□□□ 0.26
LITAF-201ENST00000339430 DDIT4Q9NX09 232 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 SCN5AQ14524 2016 aa16.68■□□□□ 0.26
LITAF-201ENST00000339430 CASTOR2A6NHX0 329 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 CAPN14A8MX76 684 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 GABRDO14764 452 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 KRT36O76013 467 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 FGF3P11487 239 aaPredicted RBP16.67■□□□□ 0.26
LITAF-201ENST00000339430 PTPN3P26045 913 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 ERFP50548 548 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 CLCNKBP51801 687 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 CCNG1P51959 295 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 DAOAP59103 153 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 FAM189BP81408 668 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 LRRC26Q2I0M4 334 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 TCTN1Q2MV58 587 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 DNAAF3Q8N9W5 541 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 ZNF669Q96BR6 464 aaPredicted RBP16.67■□□□□ 0.26
LITAF-201ENST00000339430 CERS2Q96G23 380 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 APOL2Q9BQE5 337 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 SYT15Q9BQS2 421 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 FAM167BQ9BTA0 163 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 DCLRE1BQ9H816 532 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 WDR6Q9NNW5 1121 aaKnown RBP16.67■□□□□ 0.26
LITAF-201ENST00000339430 TMEM216Q9P0N5 145 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 DNAJC16Q9Y2G8 782 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.67■□□□□ 0.26
LITAF-201ENST00000339430 ENPP3O14638 875 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 ZBTB24O43167 697 aaPredicted RBP16.67■□□□□ 0.26
LITAF-201ENST00000339430 PLIN3O60664 434 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 EOMESO95936 686 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 TYK2P29597 1187 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 PGM1P36871 562 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 SLC1A6P48664 564 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 PCLAFQ15004 111 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 RCN1Q15293 331 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 DEFB128Q7Z7B8 93 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 FAM35AQ86V20 835 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 C10orf107Q8IVU9 208 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 C3orf58Q8NDZ4 430 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 ZMIZ2Q8NF64 920 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 RAB3IL1Q8TBN0 382 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 ATP2A3Q93084 1043 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 PAAF1Q9BRP4 392 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 TMEM39AQ9NV64 488 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 TBX21Q9UL17 535 aa16.67■□□□□ 0.26
LITAF-201ENST00000339430 PRR5-ARHGAP8B1AHC4 643 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 ARHGAP8P85298 464 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 ATG14Q6ZNE5 492 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 AGAP2Q99490 1192 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 UBP1Q9NZI7 540 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.26
LITAF-201ENST00000339430 ATP9BO43861 1147 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 PRKCGP05129 697 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 CCDC6Q16204 474 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 CLLU1OSQ5K130 101 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 TEDDM1Q5T9Z0 273 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 GLB1LQ6UWU2 654 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 CCNJLQ8IV13 435 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 RBM15BQ8NDT2 890 aaKnown RBP16.66■□□□□ 0.26
LITAF-201ENST00000339430 DTX3LQ8TDB6 740 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 ACMSDQ8TDX5 336 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 NAF1Q96HR8 494 aaKnown RBP16.66■□□□□ 0.26
LITAF-201ENST00000339430 CLPTM1LQ96KA5 538 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 FAM161BQ96MY7 647 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 DCDC2Q9UHG0 476 aa16.66■□□□□ 0.26
LITAF-201ENST00000339430 CCDC78A2IDD5 438 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms