RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NKIRAS1Q9NYS0 192 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 PCDHA11Q9Y5I1 949 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 RPS6KL1Q9Y6S9 549 aa7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 COL4A4P53420 1690 aaPredicted RBP7.57□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC38A8A6NNN8 435 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 NDC80O14777 642 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 STK10O94804 968 aaKnown RBP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 AP2A1O95782 977 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 EFEMP2O95967 443 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 MT-ND3P03897 115 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 MAGEA11P43364 429 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 CHRNA4P43681 627 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 CRYMQ14894 314 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 KIAA1841Q6NSI8 718 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 ANKS3Q6ZW76 656 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 PDZD4Q76G19 769 aaPredicted RBP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC26A11Q86WA9 606 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 LRRC43Q8N309 656 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 TOP1MTQ969P6 601 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 TBC1D31Q96DN5 1066 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 HMCESQ96FZ2 354 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 SERPINB11Q96P15 392 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 FAM111AQ96PZ2 611 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 CYP2S1Q96SQ9 504 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 MECRQ9BV79 373 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 CRISPLD2Q9H0B8 497 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 RNF38Q9H0F5 515 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 CCDC134Q9H6E4 229 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 XAB2Q9HCS7 855 aaKnown RBP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 ACTL7BQ9Y614 415 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 IKBKGQ9Y6K9 419 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 PATJQ8NI35 1801 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 CEP290O15078 2479 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 FAM159BA6NKW6 160 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 PRPF4O43172 522 aaKnown RBP eCLIP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 PMPCBO75439 489 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 RFPL1O75677 317 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 HLA-DQB2P05538 268 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 MX2P20592 715 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 HOXC13P31276 330 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 SERPINB6P35237 376 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC10A7Q0GE19 358 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 USP41Q3LFD5 358 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 RNF187Q5TA31 235 aaPredicted RBP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 GKAP1Q5VSY0 366 aaPredicted RBP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 ATPAF2Q8N5M1 289 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 ACVR1CQ8NER5 493 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 IPMKQ8NFU5 416 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 SPPL2BQ8TCT7 592 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 PSMG2Q969U7 264 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF333Q96JL9 665 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 CABS1Q96KC9 395 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 BRD8Q9H0E9 1235 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 GBA3Q9H227 469 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF395Q9H8N7 513 aaPredicted RBP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 TLR8Q9NR97 1041 aaKnown RBP7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 WBP1LQ9NX94 342 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 MICAL3Q7RTP6 2002 aa7.56□□□□□ -1.2
SRFBP1-201ENST00000339397 NYNRINQ9P2P1 1898 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 A0A0D9SEW6 157 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 C2orf78A6NCI8 922 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 NRG2O14511 850 aaPredicted RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 NCAM2O15394 837 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 PEX11BO96011 259 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 KLKB1P03952 638 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 HMGA1P17096 107 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 NMBRP28336 390 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC6A4P31645 630 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ACVRL1P37023 503 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 IRX4P78413 519 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 RASA2Q15283 850 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 CES4AQ5XG92 561 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC8B1Q6J4K2 584 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 MSANTD2Q6P1R3 559 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 RTL3Q8N8U3 475 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ZNF512Q96ME7 567 aaPredicted RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 TOX2Q96NM4 488 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC22A12Q96S37 553 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 MRPL9Q9BYD2 267 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 CYP4F11Q9HBI6 524 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 RBM22Q9NW64 420 aaKnown RBP eCLIP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 FETUBQ9UGM5 382 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 IPO11Q9UI26 975 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 GREB1Q4ZG55 1949 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 TRANK1O15050 2925 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 DNAH14Q0VDD8 3507 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 COL4A6Q14031 1691 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 MYO1CO00159 1063 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 SNX3O60493 162 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 LPXNO60711 386 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 CCNCP24863 283 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ETFBP38117 255 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 LIG3P49916 1009 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 SGSHP51688 502 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 RPS24P62847 133 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 SARNPP82979 210 aaKnown RBP7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 ZXDBP98169 803 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 CDK16Q00536 496 aa7.55□□□□□ -1.2
SRFBP1-201ENST00000339397 MGAT5Q09328 741 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms