RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TBC1D3GQ6DHY5 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3CQ6IPX1 549 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 KLHL10Q6JEL2 608 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 DENND1BQ6P3S1 775 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 TBC1D3Q8IZP1 549 aaPredicted RBP16.12■□□□□ 0.17
LINC01116-202ENST00000339037 OXR1Q8N573 874 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 STK32AQ8WU08 396 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 CRELD1Q96HD1 420 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 KREMEN1Q96MU8 473 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 SPAG5Q96R06 1193 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 ERVMER34-1Q9H9K5 563 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 POPDC2Q9HBU9 364 aa16.12■□□□□ 0.17
LINC01116-202ENST00000339037 NYNRINQ9P2P1 1898 aaKnown RBP16.12■□□□□ 0.17
LINC01116-202ENST00000339037 KCNU1A8MYU2 1149 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 E5RJQ4 531 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 TRUB2O95900 331 aaKnown RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 IGLV3-25P01717 112 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 VAV1P15498 845 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 PDGFRAP16234 1089 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 BMP6P22004 513 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 DRD3P35462 400 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 PPP1R2P41236 205 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 YWHAZP63104 245 aaKnown RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 MEA1Q16626 185 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 RABGAP1LQ5R372 815 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 TTC39BQ5VTQ0 682 aaPredicted RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 NAPEPLDQ6IQ20 393 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 TTI2Q6NXR4 508 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 DSG4Q86SJ6 1040 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 CIR1Q86X95 450 aaPredicted RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 CCAR2Q8N163 923 aaKnown RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 MED15Q96RN5 788 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 SLC4A5Q9BY07 1137 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 ASH1LQ9NR48 2969 aaKnown RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 SLC12A6Q9UHW9 1150 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 CNTN6Q9UQ52 1028 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 TP53BP1Q12888 1972 aaPredicted RBP16.11■□□□□ 0.17
LINC01116-202ENST00000339037 PTPRQQ9UMZ3 2332 aa16.11■□□□□ 0.17
LINC01116-202ENST00000339037 A0A1B0GVM2 712 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 TCAF2A6NFQ2 919 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 MED7O43513 233 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 LETM1O95202 739 aaPredicted RBP16.1■□□□□ 0.17
LINC01116-202ENST00000339037 SLC2A3P11169 496 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 RXRGP48443 463 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 METAP1P53582 386 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 OXCT1P55809 520 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 SEMG2Q02383 582 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 TARDBPQ13148 414 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC01116-202ENST00000339037 HES3Q5TGS1 186 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 SFMBT2Q5VUG0 894 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 TMEM110Q86TL2 294 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 PRPF39Q86UA1 669 aaKnown RBP16.1■□□□□ 0.17
LINC01116-202ENST00000339037 ELOA2Q8IYF1 753 aaPredicted RBP16.1■□□□□ 0.17
LINC01116-202ENST00000339037 ATP6V0D2Q8N8Y2 350 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 MFSD2AQ8NA29 543 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 EHBP1Q8NDI1 1231 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 PIP4K2CQ8TBX8 421 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 TSC1Q92574 1164 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 FAM131CQ96AQ9 280 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 INTS2Q9H0H0 1204 aaKnown RBP16.1■□□□□ 0.17
LINC01116-202ENST00000339037 KDM4CQ9H3R0 1056 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 THAP9Q9H5L6 903 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC01116-202ENST00000339037 AK5Q9Y6K8 562 aa16.1■□□□□ 0.17
LINC01116-202ENST00000339037 BICDL2A1A5D9 508 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 PPP1R3GB7ZBB8 358 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 SLC7A4O43246 635 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 MAP3K7O43318 606 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 PLRG1O43660 514 aaKnown RBP16.09■□□□□ 0.17
LINC01116-202ENST00000339037 RTN2O75298 545 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 AFPP02771 609 aaKnown RBP16.09■□□□□ 0.17
LINC01116-202ENST00000339037 NUDT7P0C024 238 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 MAT2AP31153 395 aaKnown RBP16.09■□□□□ 0.17
LINC01116-202ENST00000339037 NUDT1P36639 197 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 PITX1P78337 314 aaPredicted RBP16.09■□□□□ 0.17
LINC01116-202ENST00000339037 KCNH2Q12809 1159 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 BNIP3Q12983 259 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 PDCLQ13371 301 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 ILKQ13418 452 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 ARSIQ5FYB1 569 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 FAM46CQ5VWP2 391 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 CXorf57Q6NSI4 855 aaKnown RBP16.09■□□□□ 0.17
LINC01116-202ENST00000339037 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 IQCHQ86VS3 1027 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 FRS2Q8WU20 508 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 NELFBQ8WX92 580 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 OR8D1Q8WZ84 308 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 PRMT1Q99873 361 aaKnown RBP16.09■□□□□ 0.17
LINC01116-202ENST00000339037 CYTH4Q9UIA0 394 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 CTNND2Q9UQB3 1225 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
LINC01116-202ENST00000339037 SYNJ2BP-COX16A0A087WUM0 186 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 BIN1O00499 593 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 THAP12O43422 761 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 MAGEC1O60732 1142 aa16.08■□□□□ 0.16
LINC01116-202ENST00000339037 GNA14O95837 355 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms