RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CRHR1P34998 444 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 YWHAZP63104 245 aaKnown RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 IRX4P78413 519 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 OGFRL1Q5TC84 451 aaPredicted RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 WDR75Q8IWA0 830 aaKnown RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 RBM38Q9H0Z9 239 aaKnown RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 STN1Q9H668 368 aaKnown RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 SMYD2Q9NRG4 433 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 HEY1Q9Y5J3 304 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 PDCD11Q14690 1871 aaKnown RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 CLDN5O00501 218 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 CHADO15335 359 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 UGT1A9O60656 530 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 CLPTM1O96005 669 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 SERPINB6P35237 376 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 TFDP2Q14188 446 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 GRAMD1BQ3KR37 738 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 WSCD1Q658N2 575 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 KLHDC10Q6PID8 442 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 KBTBD6Q86V97 674 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 ZDHHC17Q8IUH5 632 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 PIWIL2Q8TC59 973 aaKnown RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 IRGQQ8WZA9 623 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 LPPQ93052 612 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 GCNAQ96QF7 691 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 UGT1A7Q9HAW7 530 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 UGT1A10Q9HAW8 530 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 UGT1A8Q9HAW9 530 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 POPDC2Q9HBU9 364 aa19.21■□□□□ 0.67
PSPC1-201ENST00000338910 H7C0C1 242 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 PFDN1O60925 122 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 SIN3BO75182 1162 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 MLH1P40692 756 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 ATP5OP48047 213 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 PDK2Q15119 407 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 KLC3Q6P597 504 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 NDUFAF2Q8N183 169 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 METTL25Q8N6Q8 603 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 PLD5Q8N7P1 536 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 B3GALNT2Q8NCR0 500 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 HIPK4Q8NE63 616 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 MIPOL1Q8TD10 442 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 LRRN4Q8WUT4 740 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 TNIP3Q96KP6 325 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 PPP1R10Q96QC0 940 aaKnown RBP19.2■□□□□ 0.66
PSPC1-201ENST00000338910 GAD1Q99259 594 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 SENP6Q9GZR1 1112 aaPredicted RBP19.2■□□□□ 0.66
PSPC1-201ENST00000338910 PCDH18Q9HCL0 1135 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 ZC3H7BQ9UGR2 993 aaKnown RBP19.2■□□□□ 0.66
PSPC1-201ENST00000338910 INPP5FQ9Y2H2 1132 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 HMX2A2RU54 273 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 CAPN8A6NHC0 703 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 TRDMT1O14717 391 aaKnown RBP19.2■□□□□ 0.66
PSPC1-201ENST00000338910 DESP17661 470 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 ROR1Q01973 937 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 NOMO1Q15155 1222 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 NADK2Q4G0N4 442 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 LIMS2Q7Z4I7 341 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 TSPAN18Q96SJ8 248 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 APOBEC2Q9Y235 224 aaKnown RBP19.2■□□□□ 0.66
PSPC1-201ENST00000338910 DTNAQ9Y4J8 743 aa19.2■□□□□ 0.66
PSPC1-201ENST00000338910 KRT38O76015 456 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 GSRP00390 522 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 THPOP40225 353 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 NKX3-2P78367 333 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 DEFB115Q30KQ5 88 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 SLC26A9Q7LBE3 791 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 HPS6Q86YV9 775 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 PQLC3Q8N755 202 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 KLHDC9Q8NEP7 349 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 PCDH19Q8TAB3 1148 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 FAF2Q96CS3 445 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 TSPYL2Q9H2G4 693 aaPredicted RBP19.19■□□□□ 0.66
PSPC1-201ENST00000338910 AGO3Q9H9G7 860 aaKnown RBP19.19■□□□□ 0.66
PSPC1-201ENST00000338910 CYP4F11Q9HBI6 524 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 FAM105AQ9NUU6 356 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 UBAP1Q9NZ09 502 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 DNAJC16Q9Y2G8 782 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 ZNF510Q9Y2H8 683 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 A0A0J9YVX5 310 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 ITM2AO43736 263 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 TRPA1O75762 1119 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 BEST1O76090 585 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 CSH1P0DML2 217 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 CSH2P0DML3 217 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 ITGAXP20702 1163 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 BCAR1P56945 870 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 TCHHL1Q5QJ38 904 aaPredicted RBP19.19■□□□□ 0.66
PSPC1-201ENST00000338910 CCSAPQ6IQ19 270 aaPredicted RBP19.19■□□□□ 0.66
PSPC1-201ENST00000338910 PIGZQ86VD9 579 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 MIOSQ9NXC5 875 aa19.19■□□□□ 0.66
PSPC1-201ENST00000338910 DNAJA2O60884 412 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 LYPLA1O75608 230 aaPredicted RBP19.18■□□□□ 0.66
PSPC1-201ENST00000338910 TOP3BO95985 862 aaKnown RBP19.18■□□□□ 0.66
PSPC1-201ENST00000338910 CDK4P11802 303 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 PMLP29590 882 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 LRPAP1P30533 357 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 MAGEA8P43361 318 aa19.18■□□□□ 0.66
PSPC1-201ENST00000338910 ALDH1A3P47895 512 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms