RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 BIRC5O15392 142 aa19.33■□□□□ 0.68
RFTN1-201ENST00000334133 PEX6Q13608 980 aa19.33■□□□□ 0.68
RFTN1-201ENST00000334133 MAVSQ7Z434 540 aa19.33■□□□□ 0.68
RFTN1-201ENST00000334133 RASAL3Q86YV0 1011 aa19.33■□□□□ 0.68
RFTN1-201ENST00000334133 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.33■□□□□ 0.68
RFTN1-201ENST00000334133 PIWIL2Q8TC59 973 aaKnown RBP19.33■□□□□ 0.68
RFTN1-201ENST00000334133 MTG1Q9BT17 334 aaPredicted RBP19.33■□□□□ 0.68
RFTN1-201ENST00000334133 THTPAQ9BU02 230 aa19.33■□□□□ 0.68
RFTN1-201ENST00000334133 PCSK1P29120 753 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 CRHR2Q13324 411 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 KRT72Q14CN4 511 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SPANXN3Q5MJ09 141 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SPDYAQ5MJ70 313 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 CYS1Q717R9 158 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SLC25A41Q8N5S1 370 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 GBA3Q9H227 469 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 CXorf56Q9H5V9 222 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 COPG2Q9UBF2 871 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 DCDC2Q9UHG0 476 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 GABRQQ9UN88 632 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 UPP2O95045 317 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 IL1BP01584 269 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 CCR10P46092 362 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 GLRBP48167 497 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 CXCR3P49682 368 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SCAPQ12770 1279 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 THOC5Q13769 683 aaKnown RBP19.32■□□□□ 0.68
RFTN1-201ENST00000334133 POU6F1Q14863 301 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 KCNMB4Q86W47 210 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SPATA6LQ8N4H0 392 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 IPMKQ8NFU5 416 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 APBB2Q92870 758 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 RBBP8Q99708 897 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 ADAM2Q99965 735 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SLC39A10Q9ULF5 831 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SF3B1O75533 1304 aaKnown RBP eCLIP19.32■□□□□ 0.68
RFTN1-201ENST00000334133 A0A096LPK6 155 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 PHGDHO43175 533 aaKnown RBP19.32■□□□□ 0.68
RFTN1-201ENST00000334133 DUSP11O75319 330 aaKnown RBP19.32■□□□□ 0.68
RFTN1-201ENST00000334133 RALBP11234 206 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 CCDC6Q16204 474 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 WASHC2DQ5SRD0 308 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 WDR75Q8IWA0 830 aaKnown RBP19.32■□□□□ 0.68
RFTN1-201ENST00000334133 TRIB2Q92519 343 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 ZIC5Q96T25 663 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 SORT1Q99523 831 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 CPNE1Q99829 537 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 NAT9Q9BTE0 207 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 MPP6Q9NZW5 540 aa19.32■□□□□ 0.68
RFTN1-201ENST00000334133 GALNT2Q10471 571 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 KCTD11Q693B1 232 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 NAPRTQ6XQN6 538 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 CCNJLQ8IV13 435 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 SCN4BQ8IWT1 228 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 TSPAN18Q96SJ8 248 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 CASS4Q9NQ75 786 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 C9IYK1 514 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 ODC1P11926 461 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 CPA3P15088 417 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 GJA9P57773 515 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 ZNF460Q14592 562 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 TMEM135Q86UB9 458 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 HDAC11Q96DB2 347 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 CCDC106Q9BWC9 280 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 PTCH2Q9Y6C5 1203 aa19.31■□□□□ 0.68
RFTN1-201ENST00000334133 ZMPSTE24O75844 475 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 INTS6LQ5JSJ4 861 aaKnown RBP19.3■□□□□ 0.68
RFTN1-201ENST00000334133 RAPH1Q70E73 1250 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 EFCAB3Q8N7B9 438 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 ACMSDQ8TDX5 336 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 TEKT5Q96M29 485 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 NMRK2Q9NPI5 230 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 LOC100653049A0A140TA62 436 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 HNRNPCL1O60812 293 aaKnown RBP19.3■□□□□ 0.68
RFTN1-201ENST00000334133 KRT34O76011 436 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 SERPINE1P05121 402 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 NCF2P19878 526 aaPredicted RBP19.3■□□□□ 0.68
RFTN1-201ENST00000334133 MX2P20592 715 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 SPRP35270 261 aaPredicted RBP19.3■□□□□ 0.68
RFTN1-201ENST00000334133 GRIK1P39086 918 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 SLC25A3Q00325 362 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 MPP3Q13368 585 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 GRTP1Q5TC63 336 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 OVOS1Q6IE37 1185 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 CD300LGQ6UXG3 332 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 SERINC5Q86VE9 423 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 GPR152Q8TDT2 470 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 TUBB6Q9BUF5 446 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 DMAP1Q9NPF5 467 aaPredicted RBP19.3■□□□□ 0.68
RFTN1-201ENST00000334133 TRMT13Q9NUP7 481 aaKnown RBP19.3■□□□□ 0.68
RFTN1-201ENST00000334133 G3BP2Q9UN86 482 aaKnown RBP19.3■□□□□ 0.68
RFTN1-201ENST00000334133 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
RFTN1-201ENST00000334133 B4GALT3O60512 393 aa19.29■□□□□ 0.68
RFTN1-201ENST00000334133 PMPCBO75439 489 aa19.29■□□□□ 0.68
RFTN1-201ENST00000334133 C2P06681 752 aa19.29■□□□□ 0.68
RFTN1-201ENST00000334133 EML3Q32P44 896 aa19.29■□□□□ 0.68
RFTN1-201ENST00000334133 NOMO2Q5JPE7 1267 aa19.29■□□□□ 0.68
RFTN1-201ENST00000334133 METTL23Q86XA0 190 aa19.29■□□□□ 0.68
RFTN1-201ENST00000334133 IFNL1Q8IU54 200 aa19.29■□□□□ 0.68
RFTN1-201ENST00000334133 CASP10Q92851 521 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms