RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 PCDHB5Q9Y5E4 795 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 PCDHA11Q9Y5I1 949 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 CA12O43570 354 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 MGEA5O60502 916 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 ITGBL1O95965 494 aaPredicted RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 WARSP23381 471 aaKnown RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 PTPN3P26045 913 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 YWHAQP27348 245 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 NAGLUP54802 743 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 TSTA3Q13630 321 aaPredicted RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 ACCSLQ4AC99 568 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 MARC1Q5VT66 337 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 KIAA0319Q5VV43 1072 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 LRRTM3Q86VH5 581 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 SLC41A1Q8IVJ1 513 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 C10orf107Q8IVU9 208 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 TBC1D10AQ9BXI6 508 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 HMX1Q9NP08 348 aaPredicted RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 PNPOQ9NVS9 261 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 KCNE1P15382 129 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 SLC1A6P48664 564 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 INHBEP58166 350 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 ISLR2Q6UXK2 745 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 TTC8Q8TAM2 541 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 KHSRPQ92945 711 aaKnown RBP eCLIP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 NMUR2Q9GZQ4 415 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 RNF208Q9H0X6 261 aa13.34□□□□□ -0.27
C12orf56-201ENST00000333722 UTP6Q9NYH9 597 aaKnown RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 GREB1LQ9C091 1923 aaPredicted RBP13.34□□□□□ -0.27
C12orf56-201ENST00000333722 CCDC22O60826 627 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 ANP32DO95626 131 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 ENO3P13929 434 aaPredicted RBP13.33□□□□□ -0.27
C12orf56-201ENST00000333722 NMBRP28336 390 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 CDH17Q12864 832 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 TSNAXIP1Q2TAA8 658 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 DENND6AQ8IWF6 608 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 LGI2Q8N0V4 545 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 BANPQ8N9N5 519 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 TRPV1Q8NER1 839 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 CASP10Q92851 521 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 ZNF778Q96MU6 729 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 DEFB118Q96PH6 123 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 KATNBL1Q9H079 304 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 ARL8BQ9NVJ2 186 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 ACTL7BQ9Y614 415 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 DOCK3Q8IZD9 2030 aa13.33□□□□□ -0.27
C12orf56-201ENST00000333722 GLRA3O75311 464 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 MORN1Q5T089 497 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 C17orf99Q6UX52 265 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 TTC9BQ8N6N2 239 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 GABPB2Q8TAK5 448 aaPredicted RBP13.33□□□□□ -0.28
C12orf56-201ENST00000333722 KCTD4Q8WVF5 259 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 DCXO43602 365 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 PDE5AO76074 875 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 PEX19P40855 299 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 ACLYP53396 1101 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 OCRLQ01968 901 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
C12orf56-201ENST00000333722 DEFB115Q30KQ5 88 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 TEX44Q53QW1 395 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 SLC9A4Q6AI14 798 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 ZNF280DQ6N043 979 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 RGS9BPQ6ZS82 235 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 ATP6V1E2Q96A05 226 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 OXNAD1Q96HP4 312 aaPredicted RBP13.33□□□□□ -0.28
C12orf56-201ENST00000333722 ABCC13Q9NSE7 274 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 PLK2Q9NYY3 685 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 STARD13Q9Y3M8 1113 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 FOCADQ5VW36 1801 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 STAMBPO95630 424 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 MSX2P35548 267 aaPredicted RBP13.33□□□□□ -0.28
C12orf56-201ENST00000333722 ZBTB17Q13105 803 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 ART3Q13508 389 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 LPIN1Q14693 890 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 YTHDF3Q7Z739 585 aaKnown RBP13.33□□□□□ -0.28
C12orf56-201ENST00000333722 TMA16Q96EY4 203 aaKnown RBP13.33□□□□□ -0.28
C12orf56-201ENST00000333722 CLPTM1LQ96KA5 538 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 NUF2Q9BZD4 464 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 SNX15Q9NRS6 342 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 TMEM216Q9P0N5 145 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 FBXW11Q9UKB1 542 aa13.33□□□□□ -0.28
C12orf56-201ENST00000333722 MBLAC1A4D2B0 266 aaPredicted RBP13.32□□□□□ -0.28
C12orf56-201ENST00000333722 CCDC160A6NGH7 325 aa13.32□□□□□ -0.28
C12orf56-201ENST00000333722 ANXA9O76027 345 aa13.32□□□□□ -0.28
C12orf56-201ENST00000333722 UNC5CO95185 931 aa13.32□□□□□ -0.28
C12orf56-201ENST00000333722 PRKCGP05129 697 aa13.32□□□□□ -0.28
C12orf56-201ENST00000333722 RPL9P32969 192 aaKnown RBP13.32□□□□□ -0.28
C12orf56-201ENST00000333722 RAB27AP51159 221 aa13.32□□□□□ -0.28
C12orf56-201ENST00000333722 MPP1Q00013 466 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms