RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 KDSRQ06136 332 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 TWF1Q12792 350 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 GALNT3Q14435 633 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 ZNF235Q14590 738 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 USP10Q14694 798 aaKnown RBP9.22□□□□□ -0.93
COPB2-201ENST00000333188 PTPRRQ15256 657 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 CFAP157Q5JU67 520 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 HIPK4Q8NE63 616 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 FBXO22Q8NEZ5 403 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 PPP4R1Q8TF05 950 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 TSNARE1Q96NA8 513 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 QKIQ96PU8 341 aaKnown RBP eCLIP9.22□□□□□ -0.931e-14■■■■■ 57.9
COPB2-201ENST00000333188 EFR3BQ9Y2G0 817 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 HS3ST4Q9Y661 456 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 TEX264Q9Y6I9 313 aa9.22□□□□□ -0.93
COPB2-201ENST00000333188 SF3B1O75533 1304 aaKnown RBP eCLIP9.22□□□□□ -0.932e-6■■■■■ 83.7
COPB2-201ENST00000333188 A0A0D9SEW6 157 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 LOC100653049A0A140TA62 436 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 MOXD2PA6NHM9 499 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 CCT8L1PA6NM43 557 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 KRT34O76011 436 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 TROVE2P10155 538 aaKnown RBP eCLIP9.21□□□□□ -0.93
COPB2-201ENST00000333188 NCF2P19878 526 aaPredicted RBP9.21□□□□□ -0.93
COPB2-201ENST00000333188 TAC1P20366 129 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 GARSP41250 739 aaKnown RBP9.21□□□□□ -0.93
COPB2-201ENST00000333188 CSE1LP55060 971 aaKnown RBP9.21□□□□□ -0.93
COPB2-201ENST00000333188 SLC10A7Q0GE19 358 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 TCTN1Q2MV58 587 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 ACCSLQ4AC99 568 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 N4BP2L1Q5TBK1 243 aaPredicted RBP9.21□□□□□ -0.93
COPB2-201ENST00000333188 TTC39BQ5VTQ0 682 aaPredicted RBP9.21□□□□□ -0.93
COPB2-201ENST00000333188 COLGALT2Q8IYK4 626 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 CARNMT1Q8N4J0 409 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 HMCESQ96FZ2 354 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 LRRC37BQ96QE4 947 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 ECT2Q9H8V3 914 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 RGS18Q9NS28 235 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 CHD7Q9P2D1 2997 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 TLK1Q9UKI8 766 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 MGAMO43451 1857 aa9.21□□□□□ -0.93
COPB2-201ENST00000333188 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 IRAK2O43187 625 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 SNX3O60493 162 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 DIAPH2O60879 1101 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 GALTP07902 379 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 ALDH1A3P47895 512 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 ATXN3P54252 364 aaPredicted RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 CRYMQ14894 314 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 POM121L1PQ3SYA9 428 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 TEX44Q53QW1 395 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 XKR4Q5GH76 650 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 ESRP1Q6NXG1 681 aaKnown RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 RFWD2Q8NHY2 731 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 CKAP2Q8WWK9 683 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 NCAPGQ9BPX3 1015 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 CATSPERBQ9H7T0 1116 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 XAB2Q9HCS7 855 aaKnown RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 BPIFA1Q9NP55 256 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 KANSL3Q9P2N6 904 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 OPHN1O60890 802 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 MBL2P11226 248 aaPredicted RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 CORO7P57737 925 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 PRAMEP78395 509 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 DEFB103AP81534 67 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 IKBKEQ14164 716 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 POLD3Q15054 466 aaPredicted RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 FASTKD1Q53R41 847 aaKnown RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 FAM219BQ5XKK7 198 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 SLAIN1Q8ND83 568 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 DCAKDQ8WVC6 231 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 IFT43Q96FT9 208 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 OXNAD1Q96HP4 312 aaPredicted RBP9.21□□□□□ -0.94
COPB2-201ENST00000333188 SIGLEC10Q96LC7 697 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 TASP1Q9H6P5 420 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 MAN1C1Q9NR34 630 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 TMEM161AQ9NX61 479 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 KCTD3Q9Y597 815 aa9.21□□□□□ -0.94
COPB2-201ENST00000333188 ARHGEF37A1IGU5 675 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 RAMP2O60895 175 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 GLDCP23378 1020 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 SCTRP47872 440 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 SERPINB4P48594 390 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 KCNJ2P63252 427 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 MPP1Q00013 466 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 ITGA9Q13797 1035 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 PARP6Q2NL67 630 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 MARC1Q5VT66 337 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 TXNDC8Q6A555 127 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 MFSD5Q6N075 450 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 FBXL22Q6P050 247 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 MON1AQ86VX9 555 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 CACUL1Q86Y37 369 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 PSTKQ8IV42 348 aaKnown RBP9.2□□□□□ -0.94
COPB2-201ENST00000333188 MAB21L3Q8N8X9 362 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
COPB2-201ENST00000333188 PPM1EQ8WY54 764 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms