RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DNAJC16Q9Y2G8 782 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 DNAH12Q6ZR08 3092 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 ENO1P06733 434 aaKnown RBP14.87□□□□□ -0.03
TPM3-206ENST00000330188 ELF1P32519 619 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 CPA2P48052 419 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 SERPINB8P50452 374 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 GRIK3Q13003 919 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 CRHR2Q13324 411 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 HSP90AA5PQ58FG0 334 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 FSTL4Q6MZW2 842 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 WDR75Q8IWA0 830 aaKnown RBP14.87□□□□□ -0.03
TPM3-206ENST00000330188 TEX9Q8N6V9 391 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 SCAMP5Q8TAC9 235 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 TRIB2Q92519 343 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 ATXN7L3BQ96GX2 97 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 ZNF570Q96NI8 536 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 SIKE1Q9BRV8 207 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 MMADHCQ9H3L0 296 aaPredicted RBP14.87□□□□□ -0.03
TPM3-206ENST00000330188 ARHGEF38Q9NXL2 777 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 UBP1Q9NZI7 540 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 DSEQ9UL01 958 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 MAGED2Q9UNF1 606 aaPredicted RBP14.87□□□□□ -0.03
TPM3-206ENST00000330188 FNDC1Q4ZHG4 1894 aaPredicted RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 A0A0U1RQF3 1178 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 E2F8A0AVK6 867 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 MAGEB16A2A368 324 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 SERPINA6P08185 405 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 TUBB3Q13509 450 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 BEND5Q7L4P6 421 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 KLHDC8BQ8IXV7 354 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 CNTD1Q8N815 330 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 RSPH1Q8WYR4 309 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 N4BP2L2Q92802 583 aaPredicted RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 MCUR1Q96AQ8 359 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 RSRC1Q96IZ7 334 aaKnown RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 RILPQ96NA2 401 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 TSGA13Q96PP4 275 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 SORT1Q99523 831 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 IL22Q9GZX6 179 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 SPC25Q9HBM1 224 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 CHRAC1Q9NRG0 131 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.86□□□□□ -0.03
TPM3-206ENST00000330188 SOX13Q9UN79 622 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 CENPFP49454 3210 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 IRAK2O43187 625 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 CACNG3O60359 315 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 LMNAP02545 664 aaKnown RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 RPLP2P05387 115 aaKnown RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 SRGAP2BP0DMP2 458 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 TPH1P17752 444 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 ARRB2P32121 409 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 CYP2C18P33260 490 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 ALDH18A1P54886 795 aaKnown RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 COG7P83436 770 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 ZNF33AQ06730 810 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 TUSC3Q13454 348 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 CCDC153Q494R4 210 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 KHDC1Q4VXA5 237 aaKnown RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 RWDD4Q6NW29 188 aaKnown RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 ARHGAP36Q6ZRI8 547 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 OTOP3Q7RTS5 596 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 KCNMB4Q86W47 210 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 ARHGAP12Q8IWW6 846 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 PLD6Q8N2A8 252 aaKnown RBP14.86□□□□□ -0.03
TPM3-206ENST00000330188 MCMBPQ9BTE3 642 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 YY1AP1Q9H869 796 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 TAGLN3Q9UI15 199 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 INPP5FQ9Y2H2 1132 aa14.86□□□□□ -0.03
TPM3-206ENST00000330188 B2RBV5 119 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 H0Y3Z8 333 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 ADAMTS4O75173 837 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 ITGB1P05556 798 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 GRK2P25098 689 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 NMBRP28336 390 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 ABCG1P45844 678 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 CSE1LP55060 971 aaKnown RBP14.85□□□□□ -0.03
TPM3-206ENST00000330188 NKX3-2P78367 333 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 CDH17Q12864 832 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 MPP3Q13368 585 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 PRPSAP1Q14558 356 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 LPIN1Q14693 890 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 TBCCQ15814 346 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 MFSD14CQ5VZR4 134 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 OVOS1Q6IE37 1185 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 NAPEPLDQ6IQ20 393 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 RGMBQ6NW40 437 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 CLEC14AQ86T13 490 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 OR6Y1Q8NGX8 325 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 USP33Q8TEY7 942 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 ADAM2Q99965 735 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 TRIM62Q9BVG3 475 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 SIK2Q9H0K1 926 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 STN1Q9H668 368 aaKnown RBP14.85□□□□□ -0.03
TPM3-206ENST00000330188 DCLRE1BQ9H816 532 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 C20orf96Q9NUD7 363 aaPredicted RBP14.85□□□□□ -0.03
TPM3-206ENST00000330188 GABRQQ9UN88 632 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 MYO16Q9Y6X6 1858 aa14.85□□□□□ -0.03
TPM3-206ENST00000330188 PRR5-ARHGAP8B1AHC4 643 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 F8W810 466 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 DFFAO00273 331 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms