RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TRHDEQ9UKU6 1024 aa20.74■□□□□ 0.91
RIPPLY3-201ENST00000329553 TEX28O15482 410 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 CNTN5O94779 1100 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 SARNPP82979 210 aaKnown RBP20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 MPP2Q14168 576 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 ALFQ53S48 1182 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 RIBC1Q8N443 379 aaPredicted RBP20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 FIBCD1Q8N539 461 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 MGARPQ8TDB4 240 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 CKAP2Q8WWK9 683 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 IGSF8Q969P0 613 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 CFAP36Q96G28 342 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 VAT1Q99536 393 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 PPARGC1AQ9UBK2 798 aaKnown RBP20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 DOCK4Q8N1I0 1966 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 IGLV3-10A0A075B6K4 115 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 TCP11X1B4DZS4 312 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 PRRG1O14668 218 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 MAFKO60675 156 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 ELF1P32519 619 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 KPNA1P52294 538 aaPredicted RBP20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 TWF1Q12792 350 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 HECTD3Q5T447 861 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 TFAP2DQ7Z6R9 452 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 ATPAF2Q8N5M1 289 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 LRRC39Q96DD0 335 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 TEKT5Q96M29 485 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 CDK5RAP1Q96SZ6 601 aaKnown RBP20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZYG11BQ9C0D3 744 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 NOL6Q9H6R4 1146 aaKnown RBP20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 PLAC1Q9HBJ0 212 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 PRKAG2Q9UGJ0 569 aa20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZC3H7BQ9UGR2 993 aaKnown RBP20.73■□□□□ 0.91
RIPPLY3-201ENST00000329553 TCRBV9S1A1TA0A576 114 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 RHOQP17081 205 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 GEMIN4P57678 1058 aaKnown RBP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 SPARCL1Q14515 664 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 TMED2Q15363 201 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 TAF12Q16514 161 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 NADSYN1Q6IA69 706 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 LRRC8BQ6P9F7 803 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 CNTD1Q8N815 330 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 USP33Q8TEY7 942 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZBED2Q9BTP6 218 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 CD248Q9HCU0 757 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 TRPM5Q9NZQ8 1165 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 FNIP2Q9P278 1114 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 SLC24A2Q9UI40 661 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 HBS1LQ9Y450 684 aaKnown RBP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 USP15Q9Y4E8 981 aaPredicted RBP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 ACTL7BQ9Y614 415 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 COCHO43405 550 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 MGRN1O60291 552 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 MLNP12872 115 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 BRAFP15056 766 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 PAPOLAP51003 745 aaKnown RBP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 FPGSQ05932 587 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 SF3A3Q12874 501 aaKnown RBP eCLIP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 PLD1Q13393 1074 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 SNCBQ16143 134 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 DNAJB7Q7Z6W7 309 aaPredicted RBP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 TCEAL8Q8IYN2 117 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 MYEOVQ96EZ4 313 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 TRIM56Q9BRZ2 755 aaKnown RBP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 NACA2Q9H009 215 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 ZBP1Q9H171 429 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 GBA3Q9H227 469 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 KCNK9Q9NPC2 374 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 FGFR1OP2Q9NVK5 253 aa20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 PIH1D1Q9NWS0 290 aaKnown RBP20.72■□□□□ 0.91
RIPPLY3-201ENST00000329553 DRGXA6NNA5 263 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 SPATA31D3P0C874 917 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 CCNB1P14635 433 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 NFKB1P19838 968 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 TMEM240Q5SV17 173 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 NUGGCQ68CJ6 796 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 SPATA31D4Q6ZUB0 917 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 EBNA1BP2Q99848 306 aaKnown RBP20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 PPCSQ9HAB8 311 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 RXFP1Q9HBX9 757 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 ABCF3Q9NUQ8 709 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 TMEM248Q9NWD8 314 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 FETUBQ9UGM5 382 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 INSL6Q9Y581 213 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 MAD1L1Q9Y6D9 718 aa20.71■□□□□ 0.91
RIPPLY3-201ENST00000329553 SPAG6O75602 509 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 CTSAP10619 480 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 OLIG2Q13516 323 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 VEPH1Q14D04 833 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 KLHL38Q2WGJ6 581 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 PRPF39Q86UA1 669 aaKnown RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 UMODL1-AS1Q8N2C9 162 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 KLHL23Q8NBE8 558 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 MAGEC3Q8TD91 643 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 TRMT2BQ96GJ1 504 aaKnown RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 INSL5Q9Y5Q6 135 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 NYNRINQ9P2P1 1898 aaKnown RBP20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 ARHGAP42A6NI28 874 aa20.7■□□□□ 0.9
RIPPLY3-201ENST00000329553 MATN3O15232 486 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms