RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 M0QZ92 97 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 AIM2O14862 343 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 LTFP02788 710 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 C2P06681 752 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 MPP3Q13368 585 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 ANKRD20A4Q4UJ75 823 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 NXNQ6DKJ4 435 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 PAQR9Q6ZVX9 377 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 GPRIN1Q7Z2K8 1008 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 TASP1Q9H6P5 420 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 MYBPHLA2RUH7 354 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 CPOXP36551 454 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 SERPINB8P50452 374 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 ATXN3P54252 364 aaPredicted RBP14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 SLC9B1Q4ZJI4 515 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 RABGAP1LQ5R372 815 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 LPCAT4Q643R3 524 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 SPATA6LQ8N4H0 392 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 RBBP8Q99708 897 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 APBA2Q99767 749 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 GDAP2Q9NXN4 497 aa14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 RCOR3Q9P2K3 495 aaPredicted RBP14.35□□□□□ -0.11
ATP2C1-201ENST00000328560 NUP205Q92621 2012 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 I6L893 689 aaPredicted RBP14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 CHRNGP07510 517 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 AFF1P51825 1210 aaKnown RBP14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 THEMIS2Q5TEJ8 643 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 KIAA0319Q5VV43 1072 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 FRMD7Q6ZUT3 714 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 CYS1Q717R9 158 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 KCNMB4Q86W47 210 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 NPLOC4Q8TAT6 608 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 URGCPQ8TCY9 931 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 PIDD1Q9HB75 910 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 EIF2B3Q9NR50 452 aaKnown RBP14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 CPA4Q9UI42 421 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 GLTPD2A6NH11 291 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 TXNDC9O14530 226 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 DSG1Q02413 1049 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 DPYSQ14117 519 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 OTOP3Q7RTS5 596 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 TLK2Q86UE8 772 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 TDRD5Q8NAT2 981 aaKnown RBP14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 MAPK15Q8TD08 544 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 IGSF9Q9P2J2 1179 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 TLK1Q9UKI8 766 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 TK2O00142 265 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 DFFAO00273 331 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 DCLK1O15075 740 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 CFLARO15519 480 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 AP2A1O95782 977 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 CD1EP15812 388 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 YBX3P16989 372 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 NMBRP28336 390 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 MSX2P35548 267 aaPredicted RBP14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 SCNN1AP37088 669 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 MFSD10Q14728 455 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 SPNS2Q8IVW8 549 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 CMTM5Q96DZ9 223 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 SENP8Q96LD8 212 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 NMRAL1Q9HBL8 299 aa14.34□□□□□ -0.11
ATP2C1-201ENST00000328560 LOC285556D6RIA3 1793 aa14.33□□□□□ -0.11
ATP2C1-201ENST00000328560 RBM47A0AV96 593 aaKnown RBP14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 FYNP06241 537 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 MPSTP25325 297 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 LIMK2P53671 638 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 TBL3Q12788 808 aaKnown RBP14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 CBLBQ13191 982 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 PAFAH1B3Q15102 231 aaKnown RBP14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 SREK1Q8WXA9 508 aaKnown RBP14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 LPPQ93052 612 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 TSNARE1Q96NA8 513 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 OR52B2Q96RD2 323 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 WDCPQ9H6R7 721 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 FIS1Q9Y3D6 152 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 CLGNO14967 610 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 ZBTB14O43829 449 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 CYP2B6P20813 491 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 POLE2P56282 527 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 ISLR2Q6UXK2 745 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 PHC3Q8NDX5 983 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 SPATA22Q8NHS9 363 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 SGF29Q96ES7 293 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 VPS39Q96JC1 886 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 MARK4Q96L34 752 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 ECSITQ9BQ95 431 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 CRTAC1Q9NQ79 661 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 OR12D3Q9UGF7 316 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 CDY2AQ9Y6F7 541 aa14.33□□□□□ -0.12
ATP2C1-201ENST00000328560 CDY1Q9Y6F8 540 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms