RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 OR8H3Q8N146 312 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 RCN3Q96D15 328 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 GFM1Q96RP9 751 aaKnown RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 KCND2Q9NZV8 630 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 BTRCQ9Y297 605 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 AKAP3O75969 853 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 FMO4P31512 558 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 BST2Q10589 180 aaKnown RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 ZNF177Q13360 481 aaPredicted RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
SMAD3-201ENST00000327367 TMEM110Q86TL2 294 aa16.72■□□□□ 0.27
SMAD3-201ENST00000327367 BTN3A1O00481 513 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 PEX11AO75192 247 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 PDHA2P29803 388 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 CDKAL1Q5VV42 579 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 KBTBD8Q8NFY9 601 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 MCFD2Q8NI22 146 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 DNAJC1Q96KC8 554 aaKnown RBP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 A8MX80 341 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 KPNA6O60684 536 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 TIPRLO75663 272 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 RTN3O95197 1032 aaPredicted RBP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 ALOX5P09917 674 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 ITGA7Q13683 1181 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 ANKS6Q68DC2 871 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 ARMC8Q8IUR7 673 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 ARL8BQ9NVJ2 186 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 DRG1Q9Y295 367 aaKnown RBP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 CAPN8A6NHC0 703 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 ARPC4P59998 168 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 CDC42P60953 191 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 TNK2Q07912 1038 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 ZNF544Q6NX49 715 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 SFRP1Q8N474 314 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 SERAC1Q96JX3 654 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 WDR12Q9GZL7 423 aaKnown RBP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 TPK1Q9H3S4 243 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 NOL11Q9H8H0 719 aaKnown RBP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 NDUFB10O96000 172 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 SP100P23497 879 aaPredicted RBP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 TTKP33981 857 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 TUFMP49411 452 aaKnown RBP16.71■□□□□ 0.27
SMAD3-201ENST00000327367 RPS6KA3P51812 740 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 SOX10P56693 466 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 NPNTQ6UXI9 565 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 LRRC20Q8TCA0 184 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 POF1BQ8WVV4 589 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 NPAS2Q99743 824 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 TBC1D24Q9ULP9 559 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 SHOC2Q9UQ13 582 aa16.71■□□□□ 0.27
SMAD3-201ENST00000327367 IFRD1O00458 451 aaPredicted RBP16.71■□□□□ 0.26
SMAD3-201ENST00000327367 C6orf222P0C671 652 aaPredicted RBP16.71■□□□□ 0.26
SMAD3-201ENST00000327367 SWT1Q5T5J6 900 aaKnown RBP16.71■□□□□ 0.26
SMAD3-201ENST00000327367 ZC3H7AQ8IWR0 971 aaKnown RBP16.71■□□□□ 0.26
SMAD3-201ENST00000327367 LPCAT1Q8NF37 534 aa16.71■□□□□ 0.26
SMAD3-201ENST00000327367 MXRA8Q9BRK3 442 aa16.71■□□□□ 0.26
SMAD3-201ENST00000327367 ZFYVE28Q9HCC9 887 aa16.71■□□□□ 0.26
SMAD3-201ENST00000327367 PDGFCQ9NRA1 345 aa16.71■□□□□ 0.26
SMAD3-201ENST00000327367 SPEF1Q9Y4P9 236 aa16.71■□□□□ 0.26
SMAD3-201ENST00000327367 ZNF879B4DU55 563 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 CHRNGP07510 517 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 IL18Q14116 193 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 KCNA10Q16322 511 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 AP5B1Q2VPB7 878 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 ATP6V0D2Q8N8Y2 350 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 MYDGFQ969H8 173 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 POLR1DQ9Y2S0 133 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 MSH4O15457 936 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 ALDH1A2O94788 518 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 AMPD1P23109 780 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 GMCL1Q96IK5 515 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 KLHL28Q9NXS3 571 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 S100A3P33764 101 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 CBWD3Q5JTY5 395 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 CBWD5Q5RIA9 395 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 ILDR2Q71H61 639 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 OMDQ99983 421 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 KCNH7Q9NS40 1196 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 U3KQV3 271 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 A0A087WZ62 844 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 MOXD2PA6NHM9 499 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 PRG2P13727 222 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 COX7A2P14406 83 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
SMAD3-201ENST00000327367 FAM20CQ8IXL6 584 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 ALG9Q9H6U8 611 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 ACSS2Q9NR19 701 aa16.7■□□□□ 0.26
SMAD3-201ENST00000327367 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
SMAD3-201ENST00000327367 EPN2O95208 641 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 FGFR1P11362 822 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 NT5C2P49902 561 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 GIT2Q14161 759 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 TFAP2DQ7Z6R9 452 aa16.69■□□□□ 0.26
SMAD3-201ENST00000327367 ELOA2Q8IYF1 753 aaPredicted RBP16.69■□□□□ 0.26
SMAD3-201ENST00000327367 PRR12Q9ULL5 1215 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms