RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 XKR3Q5GH77 459 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 KCNT2Q6UVM3 1135 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 RPS27LQ71UM5 84 aaKnown RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 PLPPR4Q7Z2D5 763 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 TLK2Q86UE8 772 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 TMA16Q96EY4 203 aaKnown RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 NPAS2Q99743 824 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 NUF2Q9BZD4 464 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 PCDHAC1Q9H158 963 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 DHX33Q9H6R0 707 aaKnown RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 SUDS3Q9H7L9 328 aaPredicted RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 PNPLA8Q9NP80 782 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 MTMR10Q9NXD2 777 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 MAFBQ9Y5Q3 323 aaPredicted RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 CROCCQ5TZA2 2017 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 BOLA2-SMG1P6H3BVE0 249 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 PAPSS1O43252 624 aaPredicted RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 GPD1P21695 349 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 GABRB2P47870 512 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 CPT1AP50416 773 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 MTTPP55157 894 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 ANKDD1AQ495B1 522 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 OGFRL1Q5TC84 451 aaPredicted RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 SLC9A4Q6AI14 798 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 AAGABQ6PD74 315 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 WDR49Q8IV35 697 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 DGCR14Q96DF8 476 aaKnown RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 AP5M1Q9H0R1 490 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 RBM38Q9H0Z9 239 aaKnown RBP12.44□□□□□ -0.42
SEC24A-201ENST00000322887 SYBUQ9NX95 663 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 ZNF180Q9UJW8 692 aa12.44□□□□□ -0.42
SEC24A-201ENST00000322887 C2CD4BA6NLJ0 364 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 GABBR2O75899 941 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 TYK2P29597 1187 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 CCND3P30281 292 aaPredicted RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 SOX11P35716 441 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 AVPR1AP37288 418 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 NAMPTP43490 491 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 RABGGTBP53611 331 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 ABCE1P61221 599 aaKnown RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 PMF1Q6P1K2 205 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 OR6J1Q8NGC5 347 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 PPP1R13LQ8WUF5 828 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 FCRL3Q96P31 734 aaPredicted RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 PAK6Q9NQU5 681 aaPredicted RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 ANLNQ9NQW6 1124 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 ARHGEF38Q9NXL2 777 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 COPG2Q9UBF2 871 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 PCDHA11Q9Y5I1 949 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 INO80B-WBP1J3KQ70 363 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 CYP2F1P24903 491 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 ZNF143P52747 638 aaPredicted RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 EMP3P54852 163 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 MAP7Q14244 749 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 FLOT2Q14254 428 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 LGSNQ5TDP6 509 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 FAM160B1Q5W0V3 765 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 NXNQ6DKJ4 435 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 B3GNT6Q6ZMB0 384 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 TSHZ1Q6ZSZ6 1077 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 SDCCAG8Q86SQ7 713 aaPredicted RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 LCA5Q86VQ0 697 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 TRIM42Q8IWZ5 723 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 PCDH20Q8N6Y1 951 aaKnown RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 PPP4R1Q8TF05 950 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 COPS5Q92905 334 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 INO80BQ9C086 356 aaPredicted RBP12.43□□□□□ -0.42
SEC24A-201ENST00000322887 SPC25Q9HBM1 224 aa12.43□□□□□ -0.42
SEC24A-201ENST00000322887 C7orf72A4D263 438 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 TK2O00142 265 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ADAMTS4O75173 837 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 RNASEH2AO75792 299 aaKnown RBP12.42□□□□□ -0.42
SEC24A-201ENST00000322887 HSPA4LO95757 839 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 MT-CO1P00395 513 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 SERPINE1P05121 402 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 MMP3P08254 477 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 TAP1Q03518 808 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 RALGDSQ12967 914 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ZNF460Q14592 562 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 DGKDQ16760 1214 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 SLFN12LQ6IEE8 588 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 DSELQ8IZU8 1212 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 CCDC185Q8N715 623 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ATP6V1E2Q96A05 226 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 DNAJB4Q9UDY4 337 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ITGA11Q9UKX5 1188 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 EFR3BQ9Y2G0 817 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 ZSCAN9O15535 394 aaPredicted RBP12.42□□□□□ -0.42
SEC24A-201ENST00000322887 DYNC1LI2O43237 492 aaPredicted RBP12.42□□□□□ -0.42
SEC24A-201ENST00000322887 KLHL2O95198 593 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 PRKCBP05771 671 aa12.42□□□□□ -0.42
SEC24A-201ENST00000322887 RPL5P46777 297 aaKnown RBP12.42□□□□□ -0.42
SEC24A-201ENST00000322887 PSMD7P51665 324 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms