RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 FSTL4Q6MZW2 842 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 RMND5BQ96G75 393 aaPredicted RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 NRBP2Q9NSY0 501 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 FAIMQ9NVQ4 179 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 SEPT10Q9P0V9 454 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 CNOT11Q9UKZ1 510 aaKnown RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 AP4S1Q9Y587 144 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 TTC36A6NLP5 189 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 CAPNS1P04632 268 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 ZFXP17010 805 aaPredicted RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 TFE3P19532 575 aaPredicted RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 ALDH3B2P48448 385 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 NR2C2P49116 596 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 ATXN1P54253 815 aaKnown RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 ITPRIPL1Q6GPH6 555 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 HACE1Q8IYU2 909 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 C12orf29Q8N999 325 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 LRTOMTQ8WZ04 291 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 BIRC8Q96P09 236 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 NAT9Q9BTE0 207 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 OSBPL11Q9BXB4 747 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 RPF1Q9H9Y2 349 aaKnown RBP18.24■□□□□ 0.51
PRKCB-202ENST00000321728 DTLQ9NZJ0 730 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 RAP2CQ9Y3L5 183 aa18.24■□□□□ 0.51
PRKCB-202ENST00000321728 SH3PXD2BA1X283 911 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 PIGNO95427 931 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 GJB1P08034 283 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 HMGCS2P54868 508 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 CDH15P55291 814 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 TXNL4AP83876 142 aaKnown RBP18.23■□□□□ 0.51
PRKCB-202ENST00000321728 PDAP1Q13442 181 aaKnown RBP18.23■□□□□ 0.51
PRKCB-202ENST00000321728 IKBKEQ14164 716 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 MPZL3Q6UWV2 235 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 RBBP8Q99708 897 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 OSBPL6Q9BZF3 934 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 GBA2Q9HCG7 927 aaPredicted RBP18.23■□□□□ 0.51
PRKCB-202ENST00000321728 CDYLQ9Y232 598 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 HES2Q9Y543 173 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 SNX13Q9Y5W8 968 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 SQORQ9Y6N5 450 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 H3BNH8 94 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 TFEBP19484 476 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 NDST1P52848 882 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 NUP107P57740 925 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 LAMTOR4Q0VGL1 99 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 ARL13AQ5H913 290 aaPredicted RBP18.23■□□□□ 0.51
PRKCB-202ENST00000321728 LRRC71Q8N4P6 559 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 ZNF597Q96LX8 424 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 AGAP2Q99490 1192 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 DCUN1D5Q9BTE7 237 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 TBCCD1Q9NVR7 557 aa18.23■□□□□ 0.51
PRKCB-202ENST00000321728 PAIP2BQ9ULR5 123 aaKnown RBP18.23■□□□□ 0.51
PRKCB-202ENST00000321728 PTPRFP10586 1907 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 B4GALT5O43286 388 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PDGFRBP09619 1106 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 GRIA4P48058 902 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 DPYSQ14117 519 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 ATF7IP2Q5U623 682 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 CLVS1Q8IUQ0 354 aaPredicted RBP18.22■□□□□ 0.51
PRKCB-202ENST00000321728 CPSF7Q8N684 471 aaKnown RBP18.22■□□□□ 0.51
PRKCB-202ENST00000321728 FCRL3Q96P31 734 aaPredicted RBP18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PCDHAC1Q9H158 963 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PNPLA3Q9NST1 481 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 OXSMQ9NWU1 459 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PGAP2Q9UHJ9 254 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 INO80B-WBP1J3KQ70 363 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 DPYSL4O14531 572 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 H2AFYO75367 372 aaKnown RBP18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PSMB4P28070 264 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 OLIG2Q13516 323 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 GOLGA7BQ2TAP0 167 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 EEF1DP3Q658K8 133 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PMF1Q6P1K2 205 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 OLFML1Q6UWY5 402 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 CARM1Q86X55 608 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 PCDH20Q8N6Y1 951 aaKnown RBP18.22■□□□□ 0.51
PRKCB-202ENST00000321728 URGCPQ8TCY9 931 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 GIPC3Q8TF64 312 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 ZNF669Q96BR6 464 aaPredicted RBP18.22■□□□□ 0.51
PRKCB-202ENST00000321728 CSPG4P5Q96PW8 444 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 ZBTB26Q9HCK0 441 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 FAM49BQ9NUQ9 324 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 GGA3Q9NZ52 723 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 HESX1Q9UBX0 185 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 AP4E1Q9UPM8 1137 aa18.22■□□□□ 0.51
PRKCB-202ENST00000321728 RNF103O00237 685 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 TRIM38O00635 465 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 GRID2O43424 1007 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 MAFO75444 373 aaPredicted RBP18.21■□□□□ 0.51
PRKCB-202ENST00000321728 TADA2AO75478 443 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 C2P06681 752 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 SAT1P21673 171 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 LIMK2P53671 638 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 NAA20P61599 178 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 TARBP2Q15633 366 aaKnown RBP18.21■□□□□ 0.51
PRKCB-202ENST00000321728 Q6ZNX1 250 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 CIB1Q99828 191 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 TASP1Q9H6P5 420 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 OLAHQ9NV23 265 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms