RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 AVPR1AP37288 418 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 CCR10P46092 362 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 GRTP1Q5TC63 336 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 PDPK2PQ6A1A2 396 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 OTOP3Q7RTS5 596 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 NET1Q7Z628 596 aaPredicted RBP17.79■□□□□ 0.44
COL9A1-201ENST00000320755 GTF3C2Q8WUA4 911 aaPredicted RBP17.79■□□□□ 0.44
COL9A1-201ENST00000320755 RBBP8Q99708 897 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 TKTL2Q9H0I9 626 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 WDCPQ9H6R7 721 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 OR12D3Q9UGF7 316 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 PLXNB2O15031 1838 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 SBF1O95248 1867 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 KIF1CO43896 1103 aaKnown RBP17.79■□□□□ 0.44
COL9A1-201ENST00000320755 AP2A1O95782 977 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 LINGO3P0C6S8 592 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 CLCNKBP51801 687 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 COPAP53621 1224 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 DAOAP59103 153 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 CCL14Q16627 93 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 PAAF1Q9BRP4 392 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 MLPHQ9BV36 600 aaPredicted RBP17.79■□□□□ 0.44
COL9A1-201ENST00000320755 A0A088AWK7 358 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 LTFP02788 710 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 GRK2P25098 689 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 AXLP30530 894 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 CPOXP36551 454 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 ZRSR2Q15696 482 aaKnown RBP17.78■□□□□ 0.44
COL9A1-201ENST00000320755 TRMT5Q32P41 509 aaKnown RBP17.78■□□□□ 0.44
COL9A1-201ENST00000320755 RABGAP1LQ5R372 815 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 SPNS2Q8IVW8 549 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 SLC26A7Q8TE54 656 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 ZC3H15Q8WU90 426 aaKnown RBP17.78■□□□□ 0.44
COL9A1-201ENST00000320755 SLC2A13Q96QE2 648 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 APBA2Q99767 749 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 COLEC11Q9BWP8 271 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 COG4Q9H9E3 785 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 FLRT1Q9NZU1 646 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 PHGDHO43175 533 aaKnown RBP17.78■□□□□ 0.44
COL9A1-201ENST00000320755 C2P06681 752 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 UBTFL6P0CB48 400 aaPredicted RBP17.78■□□□□ 0.44
COL9A1-201ENST00000320755 AOC1P19801 751 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 NMBRP28336 390 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 ACTR3P61158 418 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 CUL3Q13618 768 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 FAM35AQ86V20 835 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 KCNMB4Q86W47 210 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 ZMIZ2Q8NF64 920 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 SPATA22Q8NHS9 363 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 URGCPQ8TCY9 931 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 HASPINQ8TF76 798 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 DDX50Q9BQ39 737 aaKnown RBP17.78■□□□□ 0.44
COL9A1-201ENST00000320755 ZNF212Q9UDV6 495 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 ANGPTL2Q9UKU9 493 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 LRCH1Q9Y2L9 728 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 BRCA2P51587 3418 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 ZCWPW2A0A1B0GU75 182 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 A6NHS1 94 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 DFFAO00273 331 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 KLHL2O95198 593 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 CD1EP15812 388 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 AP2B1P63010 937 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 MPP3Q13368 585 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 TCHHL1Q5QJ38 904 aaPredicted RBP17.78■□□□□ 0.44
COL9A1-201ENST00000320755 IZUMO2Q6UXV1 221 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 SPATA6LQ8N4H0 392 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 NDE1Q9NXR1 346 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 FBXW11Q9UKB1 542 aa17.78■□□□□ 0.44
COL9A1-201ENST00000320755 DICER1Q9UPY3 1922 aaKnown RBP17.77■□□□□ 0.44
COL9A1-201ENST00000320755 ENO4A6NNW6 628 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.77■□□□□ 0.44
COL9A1-201ENST00000320755 SERPINB8P50452 374 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 SLC9B1Q4ZJI4 515 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 STXBP5Q5T5C0 1151 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 DEFB107AQ8IZN7 70 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 C3orf58Q8NDZ4 430 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 PTPN18Q99952 460 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 MIOSQ9NXC5 875 aa17.77■□□□□ 0.44
COL9A1-201ENST00000320755 LRIG2O94898 1065 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 CHRNGP07510 517 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 CYP2B6P20813 491 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 LIMK2P53671 638 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 MRPS35P82673 323 aaKnown RBP17.77■□□□□ 0.43
COL9A1-201ENST00000320755 TBCCQ15814 346 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 ARL13BQ3SXY8 428 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 MAPK15Q8TD08 544 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 KCTD13Q8WZ19 329 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 SCYL1Q96KG9 808 aa17.77■□□□□ 0.43
COL9A1-201ENST00000320755 ZNF184Q99676 751 aaPredicted RBP17.77■□□□□ 0.43
COL9A1-201ENST00000320755 WDR55Q9H6Y2 383 aaPredicted RBP17.77■□□□□ 0.43
COL9A1-201ENST00000320755 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
COL9A1-201ENST00000320755 ARHGAP36Q6ZRI8 547 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 TASP1Q9H6P5 420 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 NMRAL1Q9HBL8 299 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 GNEQ9Y223 722 aaKnown RBP17.76■□□□□ 0.43
COL9A1-201ENST00000320755 F8W8V4 182 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 TK2O00142 265 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 SERPINB5P36952 375 aa17.76■□□□□ 0.43
COL9A1-201ENST00000320755 CCNHP51946 323 aaPredicted RBP17.76■□□□□ 0.43
COL9A1-201ENST00000320755 CRYBB1P53674 252 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms