RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SETSIPP0DME0 302 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 PCSK6P29122 969 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 MATKP42679 507 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SCNN1GP51170 649 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SLC18A2Q05940 514 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 ARHGAP17Q68EM7 881 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SLC26A11Q86WA9 606 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SNRNP27Q8WVK2 155 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 CCDC124Q96CT7 223 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SENP8Q96LD8 212 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 GCNAQ96QF7 691 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 SMIM31A0A1B0GVY4 71 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 RNF103O00237 685 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 TNPO2O14787 897 aaKnown RBP15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 CDK4P11802 303 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 NPR3P17342 541 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 PSMB4P28070 264 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 CHN2P52757 468 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 CST9Q5W186 159 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 C16orf46Q6P387 395 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 CRYBG2Q8N1P7 616 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 C3orf58Q8NDZ4 430 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 RNF139Q8WU17 664 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 PGBD4Q96DM1 585 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 PRDM12Q9H4Q4 367 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 ST3GAL5Q9UNP4 418 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 DERAQ9Y315 318 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 CDY2AQ9Y6F7 541 aa15.91■□□□□ 0.14
SHROOM1-201ENST00000319854 BCLAF3A2AJT9 711 aaKnown RBP15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 HOXD8P13378 290 aaPredicted RBP15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 MGAT1P26572 445 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 CPT1AP50416 773 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 GALK1P51570 392 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 FOLH1Q04609 750 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 TLR1Q15399 786 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 KYAT3Q6YP21 454 aaKnown RBP15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 CLEC20AQ6ZU45 233 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 PAQR9Q6ZVX9 377 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 PID1Q7Z2X4 250 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 NDUFAF2Q8N183 169 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 ANLNQ9NQW6 1124 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 UBAP1Q9NZ09 502 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 FETUBQ9UGM5 382 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 NUDT5Q9UKK9 219 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 C15orf38-AP3S2A0A0A6YYH1 394 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 CCDC160A6NGH7 325 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 XPOTO43592 962 aaKnown RBP15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 TMPRSS15P98073 1019 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 GK3PQ14409 553 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 TRIP10Q15642 601 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 NADK2Q4G0N4 442 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 DNAL1Q4LDG9 190 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 EFHC1Q5JVL4 640 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 ARPINQ7Z6K5 226 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 ADGRG6Q86SQ4 1221 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 HACE1Q8IYU2 909 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 P2RY11Q96G91 374 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 RILPQ96NA2 401 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 DUSP16Q9BY84 665 aa15.9■□□□□ 0.14
SHROOM1-201ENST00000319854 CAPN8A6NHC0 703 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 KRT37O76014 449 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 APOEP02649 317 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 PTPN9P43378 593 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 MRPS5P82675 430 aaKnown RBP15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 PEX6Q13608 980 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 ZNF534Q76KX8 674 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 ZFP28Q8NHY6 868 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 RNF34Q969K3 372 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 CRTAC1Q9NQ79 661 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 DDIT4Q9NX09 232 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 PTTG2Q9NZH5 202 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 GMEB1Q9Y692 573 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 F8W810 466 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 EMP3P54852 163 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 CHI3L2Q15782 390 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 SLC25A52Q3SY17 297 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 ANKRD20A4Q4UJ75 823 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 C1QTNF12Q5T7M4 302 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 PCED1BQ96HM7 432 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 CELF6Q96J87 481 aaKnown RBP15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 SIK2Q9H0K1 926 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 BPTFQ12830 3046 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 GOLGA8TH3BQL2 631 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 EEF2KO00418 725 aaKnown RBP15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 SNRPAP09012 282 aaKnown RBP15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 RGS2P41220 211 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 CRYBB1P53674 252 aaPredicted RBP15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 TTC39BQ5VTQ0 682 aaPredicted RBP15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 AAGABQ6PD74 315 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 TMC7Q7Z402 723 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 SIGLEC10Q96LC7 697 aa15.89■□□□□ 0.13
SHROOM1-201ENST00000319854 M0QZ92 97 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 SRGAP2BP0DMP2 458 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 ATP6V1B1P15313 513 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 MYLK3Q32MK0 819 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 B3GNT6Q6ZMB0 384 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 ZDHHC17Q8IUH5 632 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 USP33Q8TEY7 942 aa15.88■□□□□ 0.13
SHROOM1-201ENST00000319854 GRIP2Q9C0E4 1043 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms