RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CLOCKO15516 846 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 PIGNO95427 931 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SPDYE6P0CI01 402 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 GPD2P43304 727 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 IGBP1P78318 339 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 PSMD5Q16401 504 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SPDYE2Q495Y8 402 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 LIPMQ5VYY2 423 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 DENND1BQ6P3S1 775 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SCYL2Q6P3W7 929 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CPXCR1Q8N123 301 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ISOC1Q96CN7 298 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 WRNIP1Q96S55 665 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CPXM1Q96SM3 734 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 VAT1Q99536 393 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 DOK1Q99704 481 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 RBBP8Q99708 897 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ADAMTS10Q9H324 1103 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ASB7Q9H672 318 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CPSF3Q9UKF6 684 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CROTQ9UKG9 612 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TRIM17Q9Y577 477 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MYH3P11055 1940 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TYW5A2RUC4 315 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TRIM64A6NGJ6 449 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 FBP2O00757 339 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 UBDO15205 165 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 NCAM2O15394 837 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 DEAF1O75398 565 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 C2P06681 752 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 HOXB6P17509 224 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CCNA2P20248 432 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 FASP25445 335 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ARL2P36404 184 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CDKL1Q00532 357 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 NIPAL4Q0D2K0 466 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SQLEQ14534 574 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MTERF2Q49AM1 385 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ZBTB41Q5SVQ8 909 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TMTC4Q5T4D3 741 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 C6orf52Q5T4I8 152 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 KCNT2Q6UVM3 1135 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 LCLAT1Q6UWP7 414 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TAS1R3Q7RTX0 852 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TRIM50Q86XT4 487 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CXorf38Q8TB03 319 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 CENPNQ96H22 339 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ZMAT2Q96NC0 199 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TAAR1Q96RJ0 339 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ADI1Q9BV57 179 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 MRPL46Q9H2W6 279 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 VRTNQ9H8Y1 702 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SELENONQ9NZV5 590 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 NXF1Q9UBU9 619 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 RNF11Q9Y3C5 154 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 DCKP27707 260 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 NPY2RP49146 381 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 HLCSP50747 726 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF135P52742 658 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 OAZ1P54368 228 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 SESN2P58004 480 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 AASDHQ4L235 1098 aaPredicted RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 IER5Q5VY09 327 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 NXNQ6DKJ4 435 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 DUS1LQ6P1R4 473 aaKnown RBP4.87□□□□□ -1.63
PTPN13-201ENST00000316707 HOMEZQ8IX15 550 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF786Q8N393 782 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 TMEM176AQ96HP8 235 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 COQ10BQ9H8M1 238 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 NHSL1Q5SYE7 1610 aa4.87□□□□□ -1.63
PTPN13-201ENST00000316707 LAMB1P07942 1786 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 RGPD5Q99666 1765 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NFIBO00712 420 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NPHS1O60500 1241 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 CILPO75339 1184 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 BCL10O95999 233 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SUPT20HL2P0C7V6 817 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PSMA4P25789 261 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 TNFAIP2Q03169 654 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SPP2Q13103 211 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MXD4Q14582 209 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 DOK7Q18PE1 504 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 SUPT20HL1Q3ZLR7 823 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PPP6R3Q5H9R7 873 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 INTS6LQ5JSJ4 861 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 FAM160B1Q5W0V3 765 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF534Q76KX8 674 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 MAVSQ7Z434 540 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 DHRSXQ8N5I4 330 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 OSCP1Q8WVF1 389 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZUFSPQ96AP4 578 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 AKT1S1Q96B36 256 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 HOPXQ9BPY8 73 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 BCL7BQ9BQE9 202 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 OXCT2Q9BYC2 517 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 NIFKQ9BYG3 293 aaKnown RBP4.86□□□□□ -1.63
PTPN13-201ENST00000316707 LRRC4Q9HBW1 653 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 ZBTB26Q9HCK0 441 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 HMG20AQ9NP66 347 aa4.86□□□□□ -1.63
PTPN13-201ENST00000316707 PSME2Q9UL46 239 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms