RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 VANGL2Q9ULK5 521 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 CDY1Q9Y6F8 540 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 A6NHS1 94 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 CABYRO75952 493 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 JCHAINP01591 159 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ATP6V1C1P21283 382 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 TGM2P21980 687 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SP100P23497 879 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 RPL34P49207 117 aaKnown RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 PEX6Q13608 980 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 RAB41Q5JT25 222 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 C4orf50Q6ZRC1 276 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 CDHR3Q6ZTQ4 885 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 OTOP3Q7RTS5 596 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 LMNTD2Q8IXW0 634 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF567Q8N184 647 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SLAIN1Q8ND83 568 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SPATA22Q8NHS9 363 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SERAC1Q96JX3 654 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 FCRL2Q96LA5 508 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SLC2A13Q96QE2 648 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 BEGAINQ9BUH8 593 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 NMUR2Q9GZQ4 415 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 KLC2Q9H0B6 622 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 GMIPQ9P107 970 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 KLHL8Q9P2G9 620 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 NUP205Q92621 2012 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF236Q9UL36 1845 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ZBTB24O43167 697 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ATP9BO43861 1147 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 TYROBPO43914 113 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 PAGE1O75459 146 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 DCTN3O75935 186 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 MT-CYBP00156 380 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 MYL2P10916 166 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 CCL5P13501 91 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ITGB8P26012 769 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 RASSF2P50749 326 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 IRX1P78414 480 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 KLC1Q07866 573 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 DSC1Q08554 894 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 KCNJ11Q14654 390 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 PSMD5Q16401 504 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 CTC1Q2NKJ3 1217 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 MROH9Q5TGP6 573 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 FYB2Q5VWT5 728 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 C14orf80Q86SX3 495 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 CFAP52Q8N1V2 620 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF419Q96HQ0 510 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 PKMYT1Q99640 499 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 DNAI2Q9GZS0 605 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 PAPOLBQ9NRJ5 636 aaKnown RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 GJB3O75712 270 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 STK10O94804 968 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PYGBP11216 843 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 MGAT1P26572 445 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PTPN4P29074 926 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 SERPINB4P48594 390 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 WASHC5Q12768 1159 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ZBTB17Q13105 803 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 TSNAXIP1Q2TAA8 658 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 AP1ARQ63HQ0 302 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 DNAAF3Q8N9W5 541 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 OR52K1Q8NGK4 314 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ATP2A3Q93084 1043 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 CCDC124Q96CT7 223 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 CASD1Q96PB1 797 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 TSSK1BQ9BXA7 367 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 CCSER2Q9H7U1 834 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PRDM16Q9HAZ2 1276 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PLAC1Q9HBJ0 212 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 CSNK1G1Q9HCP0 422 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 SMYD2Q9NRG4 433 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PAK5Q9P286 719 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PSMC3IPQ9P2W1 217 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ACTL7AQ9Y615 435 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 IKBKGQ9Y6K9 419 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 BCLAF3A2AJT9 711 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 LPXNO60711 386 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 LUC7L3O95232 432 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 EOMESO95936 686 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ESRRAP11474 423 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 OR1D2P34982 312 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ALDH7A1P49419 539 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ARFIP2P53365 341 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ALDH18A1P54886 795 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 GEMIN4P57678 1058 aaKnown RBP7.78□□□□□ -1.16
TRIM55-202ENST00000315962 MAXP61244 160 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 TAF10Q12962 218 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ARL13BQ3SXY8 428 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 FAM26DQ5JW98 314 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 SLC30A9Q6PML9 568 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF534Q76KX8 674 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 OTOP2Q7RTS6 562 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 PCGF5Q86SE9 256 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 POU5F2Q8N7G0 328 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 ATP11CQ8NB49 1132 aa7.78□□□□□ -1.16
TRIM55-202ENST00000315962 STMN2Q93045 179 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms