RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NIPAL4Q0D2K0 466 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 SMARCB1Q12824 385 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 PSMD5Q16401 504 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 TRIM60Q495X7 471 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 AFMIDQ63HM1 303 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 MIB1Q86YT6 1006 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 ZNF683Q8IZ20 524 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 ZNF75CPQ92670 426 aaPredicted RBP18.77■□□□□ 0.59
CCDC43-201ENST00000315286 FCRL3Q96P31 734 aaPredicted RBP18.77■□□□□ 0.59
CCDC43-201ENST00000315286 TMEM51Q9NW97 253 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 BFARQ9NZS9 450 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 RPS6KL1Q9Y6S9 549 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 CACNG3O60359 315 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 POLBP06746 335 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 ETV4P43268 484 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 MS4A13Q5J8X5 152 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 C10orf120Q5SQS8 335 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 CDHR3Q6ZTQ4 885 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 MARK2Q7KZI7 788 aaKnown RBP18.76■□□□□ 0.59
CCDC43-201ENST00000315286 FBXO22Q8NEZ5 403 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 MTBPQ96DY7 904 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 IL1RAPL1Q9NZN1 696 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 MARCH2Q9P0N8 246 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 PHTF1Q9UMS5 762 aa18.76■□□□□ 0.59
CCDC43-201ENST00000315286 COPEO14579 308 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 MATN3O15232 486 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 ALDH7A1P49419 539 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 PSEN1P49768 467 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 SERPINB9P50453 376 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 PAPOLAP51003 745 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 PRPSAP1Q14558 356 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 TRIP4Q15650 581 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 SMAD1Q15797 465 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 CERCAMQ5T4B2 595 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 ZNF784Q8NCA9 323 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 CDKL2Q92772 493 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 GRAMD1AQ96CP6 724 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 FAM111AQ96PZ2 611 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 IL12RB2Q99665 862 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 VPS11Q9H270 941 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 KDM4CQ9H3R0 1056 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 NOL6Q9H6R4 1146 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 LRRC40Q9H9A6 602 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 PRKAG3Q9UGI9 489 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 WASH4PA8MWX3 477 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 PARNO95453 639 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 DHRS4L1P0CG22 281 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 ERVK-10P10266 1014 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 ALADP13716 330 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 RPL17P18621 184 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 ATF6P18850 670 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 SPANXN3Q5MJ09 141 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 SPATA22Q8NHS9 363 aa18.75■□□□□ 0.59
CCDC43-201ENST00000315286 C2orf15Q8WU43 125 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 SRPK1Q96SB4 655 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 ALG13Q9NP73 1137 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 PRDM5Q9NQX1 630 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 OLA1Q9NTK5 396 aaKnown RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 MAGED2Q9UNF1 606 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-201ENST00000315286 ATP9BO43861 1147 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 EDF1O60869 148 aaKnown RBP18.74■□□□□ 0.59
CCDC43-201ENST00000315286 EFEMP2O95967 443 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 HMBSP08397 361 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 TPH1P17752 444 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 RPL10AP62906 217 aaKnown RBP18.74■□□□□ 0.59
CCDC43-201ENST00000315286 TRPM8Q7Z2W7 1104 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 TFAP2DQ7Z6R9 452 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 TMEM135Q86UB9 458 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 KLHDC8BQ8IXV7 354 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 ATP6V0D2Q8N8Y2 350 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 VN1R3Q9BXE9 311 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 OXCT2Q9BYC2 517 aaPredicted RBP18.74■□□□□ 0.59
CCDC43-201ENST00000315286 SLC13A1Q9BZW2 595 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 CWH43Q9H720 699 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 CCSER2Q9H7U1 834 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 ARL2BPQ9Y2Y0 163 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 STARD13Q9Y3M8 1113 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 PSAT1Q9Y617 370 aa18.74■□□□□ 0.59
CCDC43-201ENST00000315286 MKI67P46013 3256 aaKnown RBP18.74■□□□□ 0.59
CCDC43-201ENST00000315286 SLC12A8A0AV02 714 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 CNTN5O94779 1100 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 CCNFP41002 786 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 MAGEA9P43362 315 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 NPY2RP49146 381 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 MGAT5Q09328 741 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 ALFQ53S48 1182 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 PACS1Q6VY07 963 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 CCDC63Q8NA47 563 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 ZNF669Q96BR6 464 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-201ENST00000315286 VWCEQ96DN2 955 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 CERS2Q96G23 380 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 BTN2A3PQ96KV6 586 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 TOX2Q96NM4 488 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 GLOD4Q9HC38 313 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 ABCF3Q9NUQ8 709 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 COMMD8Q9NX08 183 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 GGT7Q9UJ14 662 aa18.73■□□□□ 0.59
CCDC43-201ENST00000315286 MT-CYBP00156 380 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-201ENST00000315286 ZDHHC11BP0C7U3 371 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms