RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 FSTL4Q6MZW2 842 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 WDR75Q8IWA0 830 aaKnown RBP20.2■□□□□ 0.82
LRFN4-201ENST00000309602 RBM15BQ8NDT2 890 aaKnown RBP20.2■□□□□ 0.82
LRFN4-201ENST00000309602 WDR60Q8WVS4 1066 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 RNF34Q969K3 372 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 SORT1Q99523 831 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 MMADHCQ9H3L0 296 aaPredicted RBP20.2■□□□□ 0.82
LRFN4-201ENST00000309602 DCLRE1BQ9H816 532 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 CHRAC1Q9NRG0 131 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 PRR5-ARHGAP8B1AHC4 643 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 CD52P31358 61 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 SERPINB8P50452 374 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 ZNF135P52742 658 aaPredicted RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 CLNS1AP54105 237 aaKnown RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 ARHGAP8P85298 464 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 KDSRQ06136 332 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 FRG1Q14331 258 aaKnown RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 DCLRE1AQ6PJP8 1040 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 CD300LGQ6UXG3 332 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 VAT1Q99536 393 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 ACBD6Q9BR61 282 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 TAGLN3Q9UI15 199 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 MANSC4A6NHS7 340 aaPredicted RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 GPR182O15218 404 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 LMNAP02545 664 aaKnown RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 ATP5BP06576 529 aaKnown RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 PGM1P36871 562 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 LRRTM3Q86VH5 581 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 MYCBPQ99417 103 aaPredicted RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 PKMYT1Q99640 499 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 CAB39LQ9H9S4 337 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 DMAP1Q9NPF5 467 aaPredicted RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 PNPOQ9NVS9 261 aa20.19■□□□□ 0.82
LRFN4-201ENST00000309602 COL4A4P53420 1690 aaPredicted RBP20.19■□□□□ 0.82
LRFN4-201ENST00000309602 PTDSS1P48651 473 aaKnown RBP20.18■□□□□ 0.82
LRFN4-201ENST00000309602 NPY2RP49146 381 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 DLG2Q15700 870 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 ARHGAP36Q6ZRI8 547 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 OTOP3Q7RTS5 596 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 MAVSQ7Z434 540 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 KCNMB4Q86W47 210 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 TMPRSS6Q8IU80 811 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.18■□□□□ 0.82
LRFN4-201ENST00000309602 CNTD1Q8N815 330 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 OR10T2Q8NGX3 314 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 SCAMP5Q8TAC9 235 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 USP33Q8TEY7 942 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 SIKE1Q9BRV8 207 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 PADI3Q9ULW8 664 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 NEU3Q9UQ49 428 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 KRT36O76013 467 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 SRGAP2BP0DMP2 458 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 RALBP11234 206 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 GRK2P25098 689 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 ITGA9Q13797 1035 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 TAF11Q15544 211 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 RWDD4Q6NW29 188 aaKnown RBP20.18■□□□□ 0.82
LRFN4-201ENST00000309602 METTL23Q86XA0 190 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 TNS4Q8IZW8 715 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 CXorf56Q9H5V9 222 aa20.18■□□□□ 0.82
LRFN4-201ENST00000309602 C20orf96Q9NUD7 363 aaPredicted RBP20.18■□□□□ 0.82
LRFN4-201ENST00000309602 SPECC1L-ADORA2AF8WAN1 911 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 CYP11A1P05108 521 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 CPA3P15088 417 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 NMBRP28336 390 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 IRF9Q00978 393 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 RABGAP1LQ5R372 815 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.17■□□□□ 0.82
LRFN4-201ENST00000309602 ACVR1CQ8NER5 493 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 IL22Q9GZX6 179 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 SIK2Q9H0K1 926 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 SOX13Q9UN79 622 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 PLA2G4CQ9UP65 541 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.17■□□□□ 0.82
LRFN4-201ENST00000309602 IGLV3-25P01717 112 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 THPOP40225 353 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 PSEN1P49768 467 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 MPP3Q13368 585 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 TBCCQ15814 346 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 CCDC153Q494R4 210 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 IFNL1Q8IU54 200 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 KIRREL3Q8IZU9 778 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 LBHD1Q9BQE6 289 aaPredicted RBP20.17■□□□□ 0.82
LRFN4-201ENST00000309602 OSBPL2Q9H1P3 480 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 IARS2Q9NSE4 1012 aaKnown RBP20.17■□□□□ 0.82
LRFN4-201ENST00000309602 LRRC42Q9Y546 428 aa20.17■□□□□ 0.82
LRFN4-201ENST00000309602 A0A096LPK6 155 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 MAGEB16A2A368 324 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 CCDC78A2IDD5 438 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 GOLGA8TH3BQL2 631 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 ZNF623O75123 536 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 CYBAP13498 195 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 RAP1GDS1P52306 607 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 ABCE1P61221 599 aaKnown RBP20.16■□□□□ 0.82
LRFN4-201ENST00000309602 RCN1Q15293 331 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 SCML4Q8N228 414 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 MAB21L3Q8N8X9 362 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 OR6Y1Q8NGX8 325 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 PPP4R1Q8TF05 950 aa20.16■□□□□ 0.82
LRFN4-201ENST00000309602 FAM161BQ96MY7 647 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms