RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 UNC5AQ6ZN44 842 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 ZBTB49Q6ZSB9 765 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 STRA8Q7Z7C7 330 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 TDRD5Q8NAT2 981 aaKnown RBP12.92□□□□□ -0.34
RETREG3-201ENST00000309428 CNDP1Q96KN2 507 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 C12orf42Q96LP6 360 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 SPON1Q9HCB6 807 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
RETREG3-201ENST00000309428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.92□□□□□ -0.34
RETREG3-201ENST00000309428 HBS1LQ9Y450 684 aaKnown RBP12.92□□□□□ -0.34
RETREG3-201ENST00000309428 SDK1Q7Z5N4 2213 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 NRXN2Q9P2S2 1712 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 C2CD4BA6NLJ0 364 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 GNGT2O14610 69 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 BDNFP23560 247 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 BRCC3P46736 316 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 RPL5P46777 297 aaKnown RBP12.92□□□□□ -0.34
RETREG3-201ENST00000309428 SLC10A2Q12908 348 aaPredicted RBP12.92□□□□□ -0.34
RETREG3-201ENST00000309428 MIB1Q86YT6 1006 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 PARP8Q8N3A8 854 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 RCN3Q96D15 328 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 HSPBAP1Q96EW2 488 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 ZNF518BQ9C0D4 1074 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 PSAT1Q9Y617 370 aa12.92□□□□□ -0.34
RETREG3-201ENST00000309428 SOCS7O14512 581 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 MAGEB3O15480 346 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ITM2AO43736 263 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 SOX4Q06945 474 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 GSTA3Q16772 222 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 GPR142Q7Z601 462 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 TLK2Q86UE8 772 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 KYQ8NBH2 561 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 OMDQ99983 421 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ILKAPQ9H0C8 392 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 TBC1D23Q9NUY8 699 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 C10orf71Q711Q0 1435 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 C1orf232A0A0U1RR37 186 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ATP6AP2A0A1C7CYW4 349 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 STX16-NPEPL1H3BU86 382 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 MAGEB2O15479 319 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ATP6AP2O75787 350 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ATG7O95352 703 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 PARNO95453 639 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 SMIM10L2AP0DMW4 78 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 SMIM10L2BP0DMW5 78 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ZNF460Q14592 562 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 BOLA3Q53S33 107 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 PPP1R2P3Q6NXS1 205 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ADGRD1Q6QNK2 874 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 CDKL3Q8IVW4 592 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 DDIASQ8IXT1 998 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 TFB1MQ8WVM0 346 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 PABPC5Q96DU9 382 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 CHST12Q9NRB3 414 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 DNAAF2Q9NVR5 837 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 CDY2AQ9Y6F7 541 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 CDY1Q9Y6F8 540 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 TTC3P53804 2025 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 C9IYK1 514 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 KDM1AO60341 852 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 SIN3BO75182 1162 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ENDOD1O94919 500 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ITGA2BP08514 1039 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 NR4A1P22736 598 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 TKTP29401 623 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 GJA9P57773 515 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 FUT11Q495W5 492 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 CERCAMQ5T4B2 595 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 ZNF398Q8TD17 642 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 DCUN1D1Q96GG9 259 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 KCTD15Q96SI1 283 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 WDR83Q9BRX9 315 aaKnown RBP12.91□□□□□ -0.34
RETREG3-201ENST00000309428 PLLPQ9Y342 182 aa12.91□□□□□ -0.34
RETREG3-201ENST00000309428 C9JVG2 144 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 TYROBPO43914 113 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 GLRA3O75311 464 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 CNMDO75829 334 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 PIRTP0C851 137 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 ABCD1P33897 745 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 CCR10P46092 362 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 CDH15P55291 814 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 ACTR3P61158 418 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 OTUD3Q5T2D3 398 aaPredicted RBP12.9□□□□□ -0.34
RETREG3-201ENST00000309428 SLC44A1Q8WWI5 657 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 NKD2Q969F2 451 aaPredicted RBP12.9□□□□□ -0.34
RETREG3-201ENST00000309428 DGCR14Q96DF8 476 aaKnown RBP12.9□□□□□ -0.34
RETREG3-201ENST00000309428 MFSD3Q96ES6 412 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 AGAP2Q99490 1192 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 IARS2Q9NSE4 1012 aaKnown RBP12.9□□□□□ -0.34
RETREG3-201ENST00000309428 ABI2Q9NYB9 513 aaPredicted RBP12.9□□□□□ -0.34
RETREG3-201ENST00000309428 CDH22Q9UJ99 828 aa12.9□□□□□ -0.34
RETREG3-201ENST00000309428 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms