RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TMEM248Q9NWD8 314 aa20.34■□□□□ 0.85
VEGFB-201ENST00000309422 INTS6Q9UL03 887 aaKnown RBP20.34■□□□□ 0.85
VEGFB-201ENST00000309422 HCN2Q9UL51 889 aa20.34■□□□□ 0.85
VEGFB-201ENST00000309422 TARSL2A2RTX5 802 aaKnown RBP20.33■□□□□ 0.84
VEGFB-201ENST00000309422 H3BRJ5 948 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 CBX4O00257 560 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 LRCH4O75427 683 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 RECQLP46063 649 aaPredicted RBP20.33■□□□□ 0.84
VEGFB-201ENST00000309422 MRE11P49959 708 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 GNA12Q03113 381 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 ASTE1Q2TB18 679 aaPredicted RBP20.33■□□□□ 0.84
VEGFB-201ENST00000309422 HNRNPA1L2Q32P51 320 aaKnown RBP20.33■□□□□ 0.84
VEGFB-201ENST00000309422 ODF2Q5BJF6 829 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 ZNF776Q68DI1 518 aaPredicted RBP20.33■□□□□ 0.84
VEGFB-201ENST00000309422 KIAA1211LQ6NV74 962 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 CACUL1Q86Y37 369 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 TMPRSS6Q8IU80 811 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 RTL3Q8N8U3 475 aaKnown RBP20.33■□□□□ 0.84
VEGFB-201ENST00000309422 ATP11CQ8NB49 1132 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 RUBCNQ92622 972 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 ARHGEF26Q96DR7 871 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 MRGPRX1Q96LB2 322 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 SNRNP25Q9BV90 132 aaKnown RBP20.33■□□□□ 0.84
VEGFB-201ENST00000309422 DNAI1Q9UI46 699 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 INTUQ9ULD6 942 aa20.33■□□□□ 0.84
VEGFB-201ENST00000309422 NDUFS2O75306 463 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 CLCN6P51797 869 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 ZBTB16Q05516 673 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 ZNF252P-AS1Q0IIN9 211 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 SRSF5Q13243 272 aaKnown RBP20.32■□□□□ 0.84
VEGFB-201ENST00000309422 CAMK2GQ13555 558 aaPredicted RBP20.32■□□□□ 0.84
VEGFB-201ENST00000309422 KRT81Q14533 505 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 POLD3Q15054 466 aaPredicted RBP20.32■□□□□ 0.84
VEGFB-201ENST00000309422 LPAL2Q16609 132 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 MANEALQ5VSG8 457 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 LPCAT2Q7L5N7 544 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 ZNF366Q8N895 744 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 RFFLQ8WZ73 363 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 HSPH1Q92598 858 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 RPL10LQ96L21 214 aaKnown RBP20.32■□□□□ 0.84
VEGFB-201ENST00000309422 PHOX2BQ99453 314 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 TRIM7Q9C029 511 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 MAGEH1Q9H213 219 aa20.32■□□□□ 0.84
VEGFB-201ENST00000309422 HRO43593 1189 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 OXTRP30559 389 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 CTSOP43234 321 aaPredicted RBP20.31■□□□□ 0.84
VEGFB-201ENST00000309422 MAGEA1P43355 309 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 NUMBP49757 651 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 ELAVL3Q14576 367 aaKnown RBP20.31■□□□□ 0.84
VEGFB-201ENST00000309422 METTL3Q86U44 580 aaKnown RBP20.31■□□□□ 0.84
VEGFB-201ENST00000309422 GANCQ8TET4 914 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 PACSIN1Q9BY11 444 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.31■□□□□ 0.84
VEGFB-201ENST00000309422 GPATCH2LQ9NWQ4 482 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 NENFQ9UMX5 172 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 SCML1Q9UN30 329 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 CYP8B1Q9UNU6 501 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 NCKAP1Q9Y2A7 1128 aa20.31■□□□□ 0.84
VEGFB-201ENST00000309422 CACNA1HO95180 2353 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 ZSCAN5CA6NGD5 496 aaPredicted RBP20.3■□□□□ 0.84
VEGFB-201ENST00000309422 FAM72CH0Y354 149 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 NRDCO43847 1150 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 HOXC13P31276 330 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 GJC1P36383 396 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 DPP6P42658 865 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 STK19P49842 368 aaPredicted RBP20.3■□□□□ 0.84
VEGFB-201ENST00000309422 VASPP50552 380 aaPredicted RBP20.3■□□□□ 0.84
VEGFB-201ENST00000309422 RPL6Q02878 288 aaKnown RBP20.3■□□□□ 0.84
VEGFB-201ENST00000309422 SLC20A2Q08357 652 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 SMTNL2Q2TAL5 461 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 PARP15Q460N3 678 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 FAM72AQ5TYM5 149 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 FAM72DQ6L9T8 149 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 ALYREFQ86V81 257 aaKnown RBP20.3■□□□□ 0.84
VEGFB-201ENST00000309422 FAM72BQ86X60 149 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 PYROXD2Q8N2H3 581 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 SPC24Q8NBT2 197 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 TEKT4Q8WW24 435 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 OR8D1Q8WZ84 308 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 LOXL4Q96JB6 756 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 BTBD6Q96KE9 485 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 VPS51Q9UID3 782 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 CACNA1IQ9P0X4 2223 aa20.3■□□□□ 0.84
VEGFB-201ENST00000309422 A0A0D9SEW6 157 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 TMEM110-MUSTN1A8MSY1 372 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 C1QTNF3-AMACRE9PGA6 284 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 SIN3BO75182 1162 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 PROSCO94903 275 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 KRT7P08729 469 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 MAN1A1P33908 653 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 P2RY2P41231 377 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 ARHGAP25P42331 645 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 NOP2P46087 812 aaKnown RBP20.29■□□□□ 0.84
VEGFB-201ENST00000309422 GSDMDP57764 484 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 YBEYP58557 167 aaPredicted RBP20.29■□□□□ 0.84
VEGFB-201ENST00000309422 RFX8Q6ZV50 586 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 NLRP14Q86W24 1093 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 MAP7D3Q8IWC1 876 aa20.29■□□□□ 0.84
VEGFB-201ENST00000309422 GPR161Q8N6U8 529 aaKnown RBP20.29■□□□□ 0.84
VEGFB-201ENST00000309422 OR7D4Q8NG98 312 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms