RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 SMARCAL1Q9NZC9 954 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 EHD2Q9NZN4 543 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 KCND2Q9NZV8 630 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 DLGAP2Q9P1A6 1054 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 AMFRQ9UKV5 643 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 DUSP12Q9UNI6 340 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 UTP11Q9Y3A2 253 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PCDHA10Q9Y5I2 948 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 R4GN57 208 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 TICRRQ7Z2Z1 1910 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 SMG1Q96Q15 3661 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CITO14578 2027 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 FAM208BQ5VWN6 2430 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 IGF2RP11717 2491 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ATRXP46100 2492 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 CELSR3Q9NYQ7 3312 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 FASNP49327 2511 aaKnown RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 A0A087WZ62 844 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 GOLGA6L10A0A0M3HER8 536 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 VGLL3A8MV65 326 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 E7EVH7 732 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 E9PMD0 336 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 F8VZ95 297 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 H0YHG0 523 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MYO1FO00160 1098 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PODXLO00592 558 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SHOXO15266 292 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PMM2O15305 246 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MSH4O15457 936 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 P4HA2O15460 535 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MAGEB2O15479 319 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF623O75123 536 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MED24O75448 989 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 RFPL2O75678 378 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PSMD10O75832 226 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 RASSF9O75901 435 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 NR3C1P04150 777 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SSBP05455 408 aaKnown RBP eCLIP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 GSTA1P08263 222 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SRGAP2BP0DMP2 458 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 GLI4P10075 376 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SLC9A1P19634 815 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 HOXA11P31270 313 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 CTNNA1P35221 906 aaKnown RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PSMC2P35998 433 aaKnown RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF76P36508 570 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ALDH7A1P49419 539 aaKnown RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 GUCY2FP51841 1108 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 POLGP54098 1239 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 GUCY1A3Q02108 690 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF844Q08AG5 666 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 TDGQ13569 410 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 UAP1Q16222 522 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 DPY19L1Q2PZI1 675 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PRR16Q569H4 304 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 NOMO2Q5JPE7 1267 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ATAT1Q5SQI0 421 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ODR4Q5SWX8 454 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 DUPD1Q68J44 220 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 C11orf63Q6NUN7 778 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 BORAQ6PGQ7 559 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 DNAJC14Q6Y2X3 702 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 FAM43BQ6ZT52 329 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 FAM124AQ86V42 546 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 NELFCDQ8IXH7 590 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 RNF168Q8IYW5 571 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MAML2Q8IZL2 1156 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 DCLK2Q8N568 766 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SH2D3CQ8N5H7 860 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 LZTR1Q8N653 840 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SLC5A5Q92911 643 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SLC35C1Q96A29 364 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF707Q96C28 371 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 CYFIP2Q96F07 1278 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 TMEM169Q96HH4 297 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 RPS6KC1Q96S38 1066 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MYCBPQ99417 103 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PSMB7Q99436 277 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 FDXACB1Q9BRP7 624 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ERP44Q9BS26 406 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 SYT11Q9BT88 431 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 RPP25Q9BUL9 199 aaKnown RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PACSIN1Q9BY11 444 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 TXLNGYQ9BZA5 131 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ROPN1BQ9BZX4 212 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC134Q9H6E4 229 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ROPN1Q9HAT0 212 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 IFT122Q9HBG6 1241 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 CD248Q9HCU0 757 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 TUFT1Q9NNX1 390 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 TBC1D22BQ9NU19 505 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 DMAC2Q9NW81 257 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MARCH5Q9NX47 278 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 MIOSQ9NXC5 875 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 PPP4R1LQ9P1A2 415 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 WRAP73Q9P2S5 460 aaPredicted RBP5.13□□□□□ -1.59
CKS1B-201ENST00000308987 C11orf21Q9P2W6 132 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 RASAL2Q9UJF2 1139 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 INPP5FQ9Y2H2 1132 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 CAPN7Q9Y6W3 813 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms