RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ZIM3Q96PE6 472 aa17.94■□□□□ 0.46
KRT28-201ENST00000306658 CDCA3Q99618 268 aaPredicted RBP17.94■□□□□ 0.46
KRT28-201ENST00000306658 CEP41Q9BYV8 373 aa17.94■□□□□ 0.46
KRT28-201ENST00000306658 TASP1Q9H6P5 420 aa17.94■□□□□ 0.46
KRT28-201ENST00000306658 PIDD1Q9HB75 910 aa17.94■□□□□ 0.46
KRT28-201ENST00000306658 DNAJC17Q9NVM6 304 aaKnown RBP17.94■□□□□ 0.46
KRT28-201ENST00000306658 IPO11Q9UI26 975 aaKnown RBP17.94■□□□□ 0.46
KRT28-201ENST00000306658 ARHGAP26Q9UNA1 814 aa17.94■□□□□ 0.46
KRT28-201ENST00000306658 PLAAQ9Y263 795 aa17.94■□□□□ 0.46
KRT28-201ENST00000306658 DOCK6Q96HP0 2047 aa17.94■□□□□ 0.46
KRT28-201ENST00000306658 A0A1B0GVM2 712 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TCRBV7S3A2A0A539 114 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TYW5A2RUC4 315 aaKnown RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 TCAF2A6NFQ2 919 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 GREM1O60565 184 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TMEM63AO94886 807 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 JCHAINP01591 159 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TPSB2P20231 275 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 MAGEA4P43358 317 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 LMAN1P49257 510 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 IFI35P80217 286 aaPredicted RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 SARNPP82979 210 aaKnown RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 ZXDBP98169 803 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 CDK16Q00536 496 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TPSAB1Q15661 275 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 HSP90B2PQ58FF3 399 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 LRIG3Q6UXM1 1119 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 ARHGAP36Q6ZRI8 547 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 GRASPQ7Z6J2 395 aaPredicted RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 CMTM8Q8IZV2 173 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 FATE1Q969F0 183 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TCEAL4Q96EI5 215 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 HMCESQ96FZ2 354 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TEKT5Q96M29 485 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 CDC42EP4Q9H3Q1 356 aaKnown RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 SAYSD1Q9NPB0 183 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 CFAP97Q9P2B7 532 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 TRDMT1O14717 391 aaKnown RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 RIPK2O43353 540 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TTC4O95801 387 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 RPS24P62847 133 aaKnown RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 ZBTB17Q13105 803 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 ZNF177Q13360 481 aaPredicted RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 TEAD2Q15562 447 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 FAM182AQ5T1J6 154 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 C6orf118Q5T5N4 469 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 ZNF354CQ86Y25 554 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 MCUQ8NE86 351 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 TTC16Q8NEE8 873 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 ZSCAN18Q8TBC5 510 aaPredicted RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 ZNF707Q96C28 371 aaPredicted RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 PRICKLE1Q96MT3 831 aaPredicted RBP17.93■□□□□ 0.46
KRT28-201ENST00000306658 AGAP3Q96P47 875 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 MAGEH1Q9H213 219 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 FAM53CQ9NYF3 392 aa17.93■□□□□ 0.46
KRT28-201ENST00000306658 LEFTY2O00292 366 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 NRG2O14511 850 aaPredicted RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 ALOX15BO15296 676 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 ZBTB24O43167 697 aaPredicted RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 OPA1O60313 960 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 TSPAN3O60637 253 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 MOSPD3O75425 235 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 NEBLO76041 1014 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 PSMB4P28070 264 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 EIF3BP55884 814 aaKnown RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 PDIA2Q13087 525 aaKnown RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 SLC29A2Q14542 456 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 PRSS36Q5K4E3 855 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 SYCP2LQ5T4T6 812 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 SETD3Q86TU7 594 aaPredicted RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 FAM217AQ8IXS0 508 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 GOLGA6L1Q8N7Z2 621 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 NSMCE1Q8WV22 266 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 SMG7Q92540 1137 aaKnown RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 TIFAQ96CG3 184 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 MRPL38Q96DV4 380 aaKnown RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 TMA16Q96EY4 203 aaKnown RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 TTC25Q96NG3 672 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 IL12RB2Q99665 862 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 SP110Q9HB58 689 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 MED4Q9NPJ6 270 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 EIF2B3Q9NR50 452 aaKnown RBP17.92■□□□□ 0.46
KRT28-201ENST00000306658 OGFRQ9NZT2 677 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 RSPH14Q9UHP6 348 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 MYO9BQ13459 2157 aa17.92■□□□□ 0.46
KRT28-201ENST00000306658 PDE4DIPQ5VU43 2346 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 EPOPA6NHQ4 379 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 AGPSO00116 658 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 NUDT17P0C025 328 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 RENBPP51606 427 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 GAD2Q05329 585 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 IFFO1Q0D2I5 559 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 SERINC3Q13530 473 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 HNRNPDQ14103 355 aaKnown RBP17.91■□□□□ 0.46
KRT28-201ENST00000306658 KYNUQ16719 465 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 SLC5A9Q2M3M2 681 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 ZBED8Q8IZ13 594 aa17.91■□□□□ 0.46
KRT28-201ENST00000306658 HJURPQ8NCD3 748 aaPredicted RBP17.91■□□□□ 0.46
KRT28-201ENST00000306658 PKNOX2Q96KN3 472 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms