RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 RCOR3Q9P2K3 495 aaPredicted RBP15.46■□□□□ 0.07
CSDC2-201ENST00000306149 STAP1Q9ULZ2 295 aa15.46■□□□□ 0.07
CSDC2-201ENST00000306149 G3BP2Q9UN86 482 aaKnown RBP15.46■□□□□ 0.07
CSDC2-201ENST00000306149 BTBD19C9JJ37 291 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 KLHL2O95198 593 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 LTFP02788 710 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 USP17L7P0C7H9 530 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 CCR10P46092 362 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 AFF1P51825 1210 aaKnown RBP15.46■□□□□ 0.06
CSDC2-201ENST00000306149 COPAP53621 1224 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 PAFAH1B3Q15102 231 aaKnown RBP15.46■□□□□ 0.06
CSDC2-201ENST00000306149 CCNJLQ8IV13 435 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.46■□□□□ 0.06
CSDC2-201ENST00000306149 NPLOC4Q8TAT6 608 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 MAPK15Q8TD08 544 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 TINF2Q9BSI4 451 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 CCDC28BQ9BUN5 200 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 FAM96AQ9H5X1 160 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 PIDD1Q9HB75 910 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 IGSF9Q9P2J2 1179 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 IPPQ9Y573 584 aa15.46■□□□□ 0.06
CSDC2-201ENST00000306149 A0A096LPK6 155 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 GOLGA8QA0A0J9YX86 632 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 GOLGA8OA6NCC3 632 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 RRN3P2A6NIE6 340 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 GOLGA8NF8WBI6 632 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 NCAM1P13591 858 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 CD68P34810 354 aaPredicted RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 CDC16Q13042 620 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 ZBTB17Q13105 803 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 SV2CQ496J9 727 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 SLC9B1Q4ZJI4 515 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 TCHHL1Q5QJ38 904 aaPredicted RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 CWF19L1Q69YN2 538 aaKnown RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 PSTKQ8IV42 348 aaKnown RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 SLC26A7Q8TE54 656 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 CELF6Q96J87 481 aaKnown RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 RBBP8Q99708 897 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 CPNE1Q99829 537 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 NAT9Q9BTE0 207 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 RHOBTB2Q9BYZ6 727 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 LRRC40Q9H9A6 602 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 COG4Q9H9E3 785 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 BFARQ9NZS9 450 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 ZCWPW2A0A1B0GU75 182 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 BUD23O43709 281 aaKnown RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 CCNT2O60583 730 aaKnown RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 LYNP07948 512 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 ZCCHC18P0CG32 403 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 MX2P20592 715 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 GRK2P25098 689 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 GARSP41250 739 aaKnown RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 TPI1P60174 286 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 ANKRD20A4Q4UJ75 823 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 SPANXN3Q5MJ09 141 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 GRTP1Q5TC63 336 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 RNF111Q6ZNA4 994 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 FRMD7Q6ZUT3 714 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 RAPH1Q70E73 1250 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 SPNS2Q8IVW8 549 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 SMG8Q8ND04 991 aaKnown RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 USP33Q8TEY7 942 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 MLPHQ9BV36 600 aaPredicted RBP15.45■□□□□ 0.06
CSDC2-201ENST00000306149 DNAJC28Q9NX36 388 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 PLXNB2O15031 1838 aa15.45■□□□□ 0.06
CSDC2-201ENST00000306149 NRCAMQ92823 1304 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 ZBTB14O43829 449 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 HSPA4LO95757 839 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 ALOX15P16050 662 aaPredicted RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 CUL3Q13618 768 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 HNRNPDQ14103 355 aaKnown RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 HPS6Q86YV9 775 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 DEFB107AQ8IZN7 70 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 S100A14Q9HCY8 104 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 WDR6Q9NNW5 1121 aaKnown RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 CRTAC1Q9NQ79 661 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 IARS2Q9NSE4 1012 aaKnown RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 C20orf96Q9NUD7 363 aaPredicted RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 DDIT4Q9NX09 232 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 MYBPHLA2RUH7 354 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 AP2A1O95782 977 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 C2P06681 752 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 MYL4P12829 197 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 NFKB1P19838 968 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 SPRP35270 261 aaPredicted RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 PNPLA4P41247 253 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 BTKQ06187 659 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 ITGA7Q13683 1181 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 CFAP157Q5JU67 520 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 TWF2Q6IBS0 349 aaKnown RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 BNIPLQ7Z465 357 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 UNKQ9C0B0 810 aaKnown RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 ABHD16BQ9H3Z7 469 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 ZDHHC7Q9NXF8 308 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 PDCD11Q14690 1871 aaKnown RBP15.44■□□□□ 0.06
CSDC2-201ENST00000306149 DOCK3Q8IZD9 2030 aa15.44■□□□□ 0.06
CSDC2-201ENST00000306149 SBF1O95248 1867 aa15.43■□□□□ 0.06
CSDC2-201ENST00000306149 G3V2L1 256 aa15.43■□□□□ 0.06
CSDC2-201ENST00000306149 NEMP1O14524 444 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms