RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 BMP10O95393 424 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PGM3O95394 542 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ZFXP17010 805 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 RAP1GAPP47736 663 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 POLD2P49005 469 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 CDK9P50750 372 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 POLE2P56282 527 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 EIF3EP60228 445 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 RPS3AP61247 264 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 IRF9Q00978 393 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 KDSRQ06136 332 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ASPHQ12797 758 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 STX3Q13277 289 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 C15orf59Q2T9L4 293 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 LDLRAD1Q5T700 205 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 DARS2Q6PI48 645 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 FAM183BPQ6ZVS7 135 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 GALNT7Q86SF2 657 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 CNTN4Q8IWV2 1026 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TRIM42Q8IWZ5 723 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TP53INP2Q8IXH6 220 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 KDM1BQ8NB78 822 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PDPRQ8NCN5 879 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TFAP2CQ92754 450 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 FKBP10Q96AY3 582 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PPP1R14BQ96C90 147 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ANKRD36BP1Q96IX9 119 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 LENG8Q96PV6 779 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 CSF3RQ99062 836 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 FTHL17Q9BXU8 183 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PPP1R12CQ9BZL4 782 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 NRDE2Q9H7Z3 1164 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 COG4Q9H9E3 785 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 VTA1Q9NP79 307 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TIMMDC1Q9NPL8 285 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 XPNPEP3Q9NQH7 507 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 RBPJLQ9UBG7 517 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 TRIP12Q14669 1992 aaPredicted RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 TCRBV5S2A0A599 114 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ZBED1O96006 694 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 MT-ND3P03897 115 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 GPD1P21695 349 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 PSMA3P25788 255 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 RPL10P27635 214 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 GRIA3P42263 894 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 MRPL19P49406 292 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 SERPINB9P50453 376 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 HMGCS2P54868 508 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ALDH18A1P54886 795 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 GBE1Q04446 702 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 DPYSQ14117 519 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 IHHQ14623 411 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ZNF699Q32M78 642 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 DCAF4L1Q3SXM0 396 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 UGT3A2Q3SY77 523 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 METTL21CQ5VZV1 264 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 LRRC8BQ6P9F7 803 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 B3GNT6Q6ZMB0 384 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 EEPD1Q7L9B9 569 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ZBTB8OSQ8IWT0 167 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 CHPFQ8IZ52 775 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 FIBCD1Q8N539 461 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 MPP4Q96JB8 637 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SNX27Q96L92 541 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 IL22Q9GZX6 179 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 SMYD3Q9H7B4 428 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ZBTB26Q9HCK0 441 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 OXSMQ9NWU1 459 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 DTLQ9NZJ0 730 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 GMPR2Q9P2T1 348 aaKnown RBP5.57□□□□□ -1.52
VPS50-202ENST00000305866 ABCD2Q9UBJ2 740 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 ADAM28Q9UKQ2 775 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 DNAJC16Q9Y2G8 782 aa5.57□□□□□ -1.52
VPS50-202ENST00000305866 HAS3O00219 553 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 UPK1AO00322 258 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TSPAN1O60635 241 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 GPR32O75388 356 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TADA2AO75478 443 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ZMPSTE24O75844 475 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TMCC1O94876 653 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TNNC2P02585 160 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 F7P08709 466 aaPredicted RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 DCKP27707 260 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 AXLP30530 894 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ABCE1P61221 599 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 VGLL4Q14135 290 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 R3HDM1Q15032 1099 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 SLC14A2Q15849 920 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 RAB41Q5JT25 222 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 GTF2IRD2BQ6EKJ0 949 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 NANOGP8Q6NSW7 305 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 GTF2IRD2Q86UP8 949 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 SLC15A3Q8IY34 581 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 PPM1NQ8N819 430 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ADCY4Q8NFM4 1077 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 TBC1D15Q8TC07 691 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 SH3RF2Q8TEC5 729 aa5.56□□□□□ -1.52
VPS50-202ENST00000305866 ZC3H15Q8WU90 426 aaKnown RBP5.56□□□□□ -1.52
VPS50-202ENST00000305866 WRNIP1Q96S55 665 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms