RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 CCNIQ14094 377 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 C6orf163Q5TEZ5 329 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 FRMD7Q6ZUT3 714 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 GATA6Q92908 595 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 ISL2Q96A47 359 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 ABHD16BQ9H3Z7 469 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 STN1Q9H668 368 aaKnown RBP13.92□□□□□ -0.18
BCCIP-202ENST00000299130 ZNF408Q9H9D4 720 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 PIDD1Q9HB75 910 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 CASS4Q9NQ75 786 aa13.92□□□□□ -0.18
BCCIP-202ENST00000299130 CPSF2Q9P2I0 782 aaKnown RBP13.92□□□□□ -0.18
BCCIP-202ENST00000299130 CCDC189A1A4V9 331 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 E9PBE3 544 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 DCXO43602 365 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 KLHL41O60662 606 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 UBTFL6P0CB48 400 aaPredicted RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 NFKB1P19838 968 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 MX2P20592 715 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 ITGAXP20702 1163 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 CYP2B6P20813 491 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 GARSP41250 739 aaKnown RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 SERPINB8P50452 374 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 AP2B1P63010 937 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 ADAM17P78536 824 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 PPIDQ08752 370 aaKnown RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 GRB14Q14449 540 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 TMCO4Q5TGY1 634 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 IQSEC1Q6DN90 963 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 TOP6BLQ8N6T0 577 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 EDEM1Q92611 657 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 CCDC124Q96CT7 223 aaKnown RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 S100A14Q9HCY8 104 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 NDE1Q9NXR1 346 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 PCDHB12Q9Y5F1 795 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 NUP205Q92621 2012 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 MYBPHLA2RUH7 354 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 GABRDO14764 452 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 C2P06681 752 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 NCAM1P13591 858 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 NMBRP28336 390 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 SPRP35270 261 aaPredicted RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 DAOAP59103 153 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 MFSD10Q14728 455 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 LRRC36Q1X8D7 754 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 FOXB2Q5VYV0 432 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 CLEC14AQ86T13 490 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 SPNS2Q8IVW8 549 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 BRI3BPQ8WY22 251 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 PPP1R36Q96LQ0 422 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 ECSITQ9BQ95 431 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 FERMT1Q9BQL6 677 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 PPP1R12CQ9BZL4 782 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 GPAMQ9HCL2 828 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 IARS2Q9NSE4 1012 aaKnown RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 DDX43Q9NXZ2 648 aaKnown RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 BFARQ9NZS9 450 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 FBXW11Q9UKB1 542 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 PACSIN3Q9UKS6 424 aa13.91□□□□□ -0.18
BCCIP-202ENST00000299130 MRPL42Q9Y6G3 142 aaKnown RBP13.91□□□□□ -0.18
BCCIP-202ENST00000299130 SHROOM3Q8TF72 1996 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CCL15-CCL14A0A0B4J2E2 113 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 HSPA4LO95757 839 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CHRNGP07510 517 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 FAM200BP0CF97 657 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 AXLP30530 894 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 EPHX2P34913 555 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CDC16Q13042 620 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CCL15Q16663 113 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CCDC153Q494R4 210 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 PGM2L1Q6PCE3 622 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 EPGNQ6UW88 154 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 HPS6Q86YV9 775 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 DEFB107AQ8IZN7 70 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CELF6Q96J87 481 aaKnown RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 OR52B2Q96RD2 323 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CDH19Q9H159 772 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 C20orf96Q9NUD7 363 aaPredicted RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 DDIT4Q9NX09 232 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 XPOTO43592 962 aaKnown RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CCNT2O60583 730 aaKnown RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 AP1G2O75843 785 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 SAT1P21673 171 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 BEX3Q00994 111 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 CUL3Q13618 768 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 ZRSR2Q15696 482 aaKnown RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 TCHHL1Q5QJ38 904 aaPredicted RBP13.9□□□□□ -0.18
BCCIP-202ENST00000299130 LPCAT4Q643R3 524 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 OTOP3Q7RTS5 596 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 BHLHA9Q7RTU4 235 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 KCNMB4Q86W47 210 aa13.9□□□□□ -0.18
BCCIP-202ENST00000299130 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms