RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PPP4CP60510 307 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 GMFBP60983 142 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 PSMD5Q16401 504 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 PTGISQ16647 500 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ZCWPW2Q504Y3 356 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 CES5AQ6NT32 575 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 STARD8Q92502 1023 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 FBXO44Q9H4M3 255 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 ARHGAP28Q9P2N2 729 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 TBC1D24Q9ULP9 559 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 GPSM3Q9Y4H4 160 aa12.26□□□□□ -0.45
PCF11-201ENST00000298281 TRPM1Q7Z4N2 1603 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 JCADQ9P266 1359 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 PLOD3O60568 738 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 RSL1D1O76021 490 aaKnown RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 GIMD1P0DJR0 217 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 CHRNA5P30532 468 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 CDKL1Q00532 357 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 FIGNQ5HY92 759 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ZNF280DQ6N043 979 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ATCAYQ86WG3 371 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 RP9Q8TA86 221 aaKnown RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 IFT52Q9Y366 437 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 TULP4Q9NRJ4 1543 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 MZT2AQ6P582 158 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 PHTF1Q9UMS5 762 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 AP3M1Q9Y2T2 418 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ZNF609O15014 1411 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 A0A0A6YYK5 440 aaPredicted RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 CYB561D2O14569 222 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ZNF557Q8N988 423 aaPredicted RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 TMEM159Q96B96 161 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 NOL6Q9H6R4 1146 aaKnown RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 ZNHIT2Q9UHR6 403 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 A8MX80 341 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 RHOCP08134 193 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 GALK1P51570 392 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ATP1A4Q13733 1029 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 BOP1Q14137 746 aaKnown RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 MZT2BQ6NZ67 158 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 KDM7AQ6ZMT4 941 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 SLC26A11Q86WA9 606 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 SCUBE1Q8IWY4 988 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ADGRF2Q8IZF7 708 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 MAGEC3Q8TD91 643 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 HASPINQ8TF76 798 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 KLF6Q99612 283 aaPredicted RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 AIFM2Q9BRQ8 373 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 PI4K2AQ9BTU6 479 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 HEY2Q9UBP5 337 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ABCC3O15438 1527 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 LOC100506127A0A0U1RQW1 187 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ERI2A8K979 691 aaKnown RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 HOXB8P17481 243 aaPredicted RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 TLX1P31314 330 aaPredicted RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 INSCQ1MX18 579 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 KIAA1324Q6UXG2 1013 aaKnown RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 TTLL2Q9BWV7 592 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 CELF4Q9BZC1 486 aaKnown RBP12.25□□□□□ -0.45
PCF11-201ENST00000298281 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCF11-201ENST00000298281 DLGAP2Q9P1A6 1054 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 CYP17A1P05093 508 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 GLRBP48167 497 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 MPP3Q13368 585 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 PYDC2Q56P42 97 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 ZDHHC17Q8IUH5 632 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 NRSN1Q8IZ57 195 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 PTPRHQ9HD43 1115 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 SNX13Q9Y5W8 968 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 IRAK3Q9Y616 596 aa12.25□□□□□ -0.45
PCF11-201ENST00000298281 USP31Q70CQ4 1352 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 PTGES3LE9PB15 166 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 CBX4O00257 560 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 ATP5BP06576 529 aaKnown RBP12.24□□□□□ -0.45
PCF11-201ENST00000298281 CPA2P48052 419 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 ZNF135P52742 658 aaPredicted RBP12.24□□□□□ -0.45
PCF11-201ENST00000298281 RETSATQ6NUM9 610 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 EXOC3L1Q86VI1 746 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 MPP5Q8N3R9 675 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 ZNF563Q8TA94 476 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 MAML3Q96JK9 1138 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 SLC4A5Q9BY07 1137 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 CST11Q9H112 138 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 C12orf4Q9NQ89 552 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 TLR8Q9NR97 1041 aaKnown RBP12.24□□□□□ -0.45
PCF11-201ENST00000298281 KCNH1O95259 989 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 CYB5AP00167 134 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 IFNA6P05013 189 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 RAG1P15918 1043 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 ITPKBP27987 946 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 TRAF3Q13114 568 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 PNMA8CA0A1B0GUJ8 204 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 H3BUI4 141 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 KCNA5P22460 613 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 ABL2P42684 1182 aa12.24□□□□□ -0.45
PCF11-201ENST00000298281 RHOAP61586 193 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms