RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 TNFSF15O95150 251 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 LUC7L3O95232 432 aaKnown RBP18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 FAM87AP0C7U9 286 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 CR2P20023 1033 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 TLE1Q04724 770 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 PPP3CAQ08209 521 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 GUSBP11Q6P575 273 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 RBM44Q6ZP01 1051 aaKnown RBP18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 APCDD1Q8J025 514 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 WDR36Q8NI36 951 aaKnown RBP18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 TATDN2Q93075 761 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 DHX58Q96C10 678 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 FAXDC2Q96IV6 333 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 ACSL6Q9UKU0 697 aa18.27■□□□□ 0.52
LRPAP1-201ENST00000296325 ITPR2Q14571 2701 aa18.27■□□□□ 0.51
LRPAP1-201ENST00000296325 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 EME2A4GXA9 379 aaPredicted RBP18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 NEBLO76041 1014 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 NR3C1P04150 777 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 SFTPCP11686 197 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 PRLRP16471 622 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 SLC8A3P57103 927 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 DAOAP59103 153 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 ZNF177Q13360 481 aaPredicted RBP18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 KMT5BQ4FZB7 885 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 MS4A13Q5J8X5 152 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 ZCCHC8Q6NZY4 707 aaKnown RBP18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 ABI3BPQ7Z7G0 1075 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 TTC39CQ8N584 583 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 IQUBQ8NA54 791 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 TPCN2Q8NHX9 752 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 ARRDC3Q96B67 414 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 IPO9Q96P70 1041 aaKnown RBP18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 NOX5Q96PH1 765 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 NUCKS1Q9H1E3 243 aaKnown RBP18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 LRRC4Q9HBW1 653 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 CNGB3Q9NQW8 809 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 CISHQ9NSE2 258 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 PPM1HQ9ULR3 514 aa18.26■□□□□ 0.51
LRPAP1-201ENST00000296325 TYW5A2RUC4 315 aaKnown RBP18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 MAPK13O15264 365 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 SLC31A1O15431 190 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 MOCS3O95396 460 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 GCLMP48507 274 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 NASPP49321 788 aaPredicted RBP18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 VASPP50552 380 aaPredicted RBP18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 VAMP7P51809 220 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 INHBCP55103 352 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 SRSF6Q13247 344 aaKnown RBP18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 CDKN3Q16667 212 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 ZNF284Q2VY69 593 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 DCAF6Q58WW2 860 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 RNF219Q5W0B1 726 aaPredicted RBP18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 GCNT7Q6ZNI0 430 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 USP53Q70EK8 1073 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 KIAA0895Q8NCT3 520 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 ZNF548Q8NEK5 533 aaPredicted RBP18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 KCTD13Q8WZ19 329 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 FCRL2Q96LA5 508 aaPredicted RBP18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 MYOCQ99972 504 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 CALN1Q9BXU9 219 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 BLZF1Q9H2G9 400 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 MAGEF1Q9HAY2 307 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 TSPAN16Q9UKR8 245 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 PCDHGA7Q9Y5G6 932 aa18.25■□□□□ 0.51
LRPAP1-201ENST00000296325 PDXKO00764 312 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 CASC3O15234 703 aaKnown RBP18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 GABBR2O75899 941 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 GJB6O95452 261 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 TBX4P57082 545 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 HNRNPKP61978 463 aaKnown RBP eCLIP18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 BST2Q10589 180 aaKnown RBP18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 STK4Q13043 487 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 GOLGA7BQ2TAP0 167 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 PIP5KL1Q5T9C9 394 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 FAM46CQ5VWP2 391 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 NEK5Q6P3R8 708 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 EFL1Q7Z2Z2 1120 aaKnown RBP18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 DSG4Q86SJ6 1040 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 CFAP52Q8N1V2 620 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 OR8D1Q8WZ84 308 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 DDX50Q9BQ39 737 aaKnown RBP18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 ARHGAP9Q9BRR9 750 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 NCKIPSDQ9NZQ3 722 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 CEP83Q9Y592 693 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 CSNK1G3Q9Y6M4 447 aa18.24■□□□□ 0.51
LRPAP1-201ENST00000296325 CCDC187A0A096LP49 1063 aa18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 ALOX15BO15296 676 aa18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 TRIM49P0CI25 452 aa18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 TRIM49CP0CI26 452 aa18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 NME1P15531 152 aaKnown RBP18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 HNRNPA2B1P22626 353 aaKnown RBP18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 MCCD1P59942 119 aaPredicted RBP18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 SERINC3Q13530 473 aa18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 ZNF542PQ5EBM4 170 aa18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 SIX6OS1Q8N1H7 587 aa18.23■□□□□ 0.51
LRPAP1-201ENST00000296325 LINC00301Q8NCQ3 95 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms