RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 DDX56Q9NY93 547 aaKnown RBP12.31□□□□□ -0.44
CLPB-201ENST00000294053 SNX13Q9Y5W8 968 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 MED7O43513 233 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 HSPA4LO95757 839 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 OCM2P0CE71 109 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
CLPB-201ENST00000294053 IGFBP6P24592 240 aaPredicted RBP12.31□□□□□ -0.44
CLPB-201ENST00000294053 EIF2B2P49770 351 aaKnown RBP12.31□□□□□ -0.44
CLPB-201ENST00000294053 SLC26A2P50443 739 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 ART3Q13508 389 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 CES3Q6UWW8 571 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 C10orf107Q8IVU9 208 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 NUP93Q8N1F7 819 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 OSMRQ99650 979 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 GOLGA2P5Q9HBQ8 144 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 KLK14Q9P0G3 267 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 CNTN3Q9P232 1028 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 DRG1Q9Y295 367 aaKnown RBP12.31□□□□□ -0.44
CLPB-201ENST00000294053 SSX2IPQ9Y2D8 614 aa12.31□□□□□ -0.44
CLPB-201ENST00000294053 BTBD19C9JJ37 291 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 TPST1O60507 370 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 MCF2P10911 925 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 COX4I1P13073 169 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 THOP1P52888 689 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 ROR1Q01973 937 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 SLC18A2Q05940 514 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 GRIK4Q16099 956 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 GOLGA7BQ2TAP0 167 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 C6orf183Q5T699 404 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 POTEHQ6S545 545 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 CYP2R1Q6VVX0 501 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 BBS12Q6ZW61 710 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 ZNF786Q8N393 782 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLPB-201ENST00000294053 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 GPRC5AQ8NFJ5 357 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 MCRS1Q96EZ8 462 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 KATNBL1Q9H079 304 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 NXF3Q9H4D5 531 aaKnown RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 TXNDC16Q9P2K2 825 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 CACNG4Q9UBN1 327 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 ASB14A6NK59 587 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 LSM1O15116 133 aaKnown RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 SPTLC1O15269 473 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 KRT7P08729 469 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 IDH3AP50213 366 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 TAP1Q03518 808 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 HADHQ16836 314 aaKnown RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 LAYNQ6UX15 382 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 NANOGNBQ7Z5D8 188 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 NDRG1Q92597 394 aaKnown RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 SLC10A4Q96EP9 437 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 SMYD2Q9NRG4 433 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 H3BNX3 289 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 ZFXP17010 805 aaPredicted RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 PTPN1P18031 435 aaKnown RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 AOC1P19801 751 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 HOXA11P31270 313 aaPredicted RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
CLPB-201ENST00000294053 LAMC2Q13753 1193 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 PPTC7Q8NI37 304 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 BTBD9Q96Q07 612 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 TBC1D23Q9NUY8 699 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 EPS15L1Q9UBC2 864 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 TRIM17Q9Y577 477 aa12.3□□□□□ -0.44
CLPB-201ENST00000294053 C2CD4BA6NLJ0 364 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 CCNT2O60583 730 aaKnown RBP12.29□□□□□ -0.44
CLPB-201ENST00000294053 RFPL1O75677 317 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 GRIA1P42261 906 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 RABGGTBP53611 331 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 ESRRGP62508 458 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 SEPT6Q14141 434 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 ZNF484Q5JVG2 852 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 CMASQ8NFW8 434 aaPredicted RBP12.29□□□□□ -0.44
CLPB-201ENST00000294053 ACTRT2Q8TDY3 377 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 CIB1Q99828 191 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 UNKQ9C0B0 810 aaKnown RBP12.29□□□□□ -0.44
CLPB-201ENST00000294053 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 SF3B1O75533 1304 aaKnown RBP eCLIP12.29□□□□□ -0.445e-6■■■■■ 115
CLPB-201ENST00000294053 CCDC130P13994 396 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 IL4RP24394 825 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 NFKBIAP25963 317 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 EPHA3P29320 983 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 PTPN7P35236 360 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 HALP42357 657 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 MPP5Q8N3R9 675 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 DDI1Q8WTU0 396 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 ATP2A3Q93084 1043 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 ATP6V1E2Q96A05 226 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 ZNF778Q96MU6 729 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 PGLYRP2Q96PD5 576 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
CLPB-201ENST00000294053 TBC1D30Q9Y2I9 924 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms