RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 FGF3P11487 239 aaPredicted RBP20.4■□□□□ 0.86
CXCL16-201ENST00000293778 GRIK1P39086 918 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 SERPINB8P50452 374 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 LIMK2P53671 638 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 NAPEPLDQ6IQ20 393 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 DCLK2Q8N568 766 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 USP33Q8TEY7 942 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 MFSD3Q96ES6 412 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 TSGA13Q96PP4 275 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 HAPLN3Q96S86 360 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 ZIC5Q96T25 663 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 AGAP2Q99490 1192 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 IL22Q9GZX6 179 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 EBF2Q9HAK2 575 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 NOP53Q9NZM5 478 aaKnown RBP20.4■□□□□ 0.86
CXCL16-201ENST00000293778 ARMCX1Q9P291 453 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 SHROOM3Q8TF72 1996 aa20.4■□□□□ 0.86
CXCL16-201ENST00000293778 PAGE1O75459 146 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 ESRRAP11474 423 aaPredicted RBP20.39■□□□□ 0.86
CXCL16-201ENST00000293778 TPH1P17752 444 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 KCNA4P22459 653 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 TM4SF4P48230 202 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 YWHAHQ04917 246 aaPredicted RBP20.39■□□□□ 0.86
CXCL16-201ENST00000293778 PCLAFQ15004 111 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 TRIM71Q2Q1W2 868 aaKnown RBP20.39■□□□□ 0.86
CXCL16-201ENST00000293778 HSP90AA5PQ58FG0 334 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 FAM26DQ5JW98 314 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 TEDDM1Q5T9Z0 273 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 CNTD1Q8N815 330 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 ISL2Q96A47 359 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 ATXN7L3BQ96GX2 97 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 SMOC2Q9H3U7 446 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 CHRAC1Q9NRG0 131 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 PPARGC1AQ9UBK2 798 aaKnown RBP20.39■□□□□ 0.86
CXCL16-201ENST00000293778 PCDHB8Q9UN66 801 aa20.39■□□□□ 0.86
CXCL16-201ENST00000293778 NLRC5Q86WI3 1866 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 DNAH12Q6ZR08 3092 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 NUP205Q92621 2012 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 AP3B1O00203 1094 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 PSMD3O43242 534 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 PRKCGP05129 697 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 CCNCP24863 283 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 CCR1P32246 355 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 MAGEA12P43365 314 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 CDH17Q12864 832 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 ARHGAP36Q6ZRI8 547 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 OTOP3Q7RTS5 596 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 CMC1Q7Z7K0 106 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 ATPAF2Q8N5M1 289 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 CADM1Q9BY67 442 aaKnown RBP20.39■□□□□ 0.85
CXCL16-201ENST00000293778 TMEM216Q9P0N5 145 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 SFMBT1Q9UHJ3 866 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 SOX13Q9UN79 622 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 PATJQ8NI35 1801 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 PTPRDP23468 1912 aa20.39■□□□□ 0.85
CXCL16-201ENST00000293778 TNFRSF10BO14763 440 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 GYG2O15488 501 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 MSI1O43347 362 aaKnown RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 ANP32DO95626 131 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 CST5P28325 142 aaPredicted RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 ITGA7Q13683 1181 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 ACCSLQ4AC99 568 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 WASHC2DQ5SRD0 308 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 LINC00523Q86TU6 105 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 KCNMB4Q86W47 210 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 ARHGAP12Q8IWW6 846 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 PCSK9Q8NBP7 692 aaKnown RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 CASP10Q92851 521 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 AZIN2Q96A70 460 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 C20orf96Q9NUD7 363 aaPredicted RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 RPL26L1Q9UNX3 145 aaKnown RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 E2F8A0AVK6 867 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 INPPL1O15357 1258 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 FGF10O15520 208 aaPredicted RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 ITM2AO43736 263 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 LYPLA1O75608 230 aaPredicted RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 SERPINE1P05121 402 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 PRKAR2AP13861 404 aaKnown RBP20.38■□□□□ 0.85
CXCL16-201ENST00000293778 HTR7P34969 479 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 SLC1A6P48664 564 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 PGFP49763 221 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 FSTL4Q6MZW2 842 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 SCD5Q86SK9 330 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 CATSPERBQ9H7T0 1116 aa20.38■□□□□ 0.85
CXCL16-201ENST00000293778 CACNG3O60359 315 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 OR4Q2P0C623 313 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 HOXC13P31276 330 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 RINLQ6ZS11 566 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 C10orf107Q8IVU9 208 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 WDR75Q8IWA0 830 aaKnown RBP20.37■□□□□ 0.85
CXCL16-201ENST00000293778 FCRL2Q96LA5 508 aaPredicted RBP20.37■□□□□ 0.85
CXCL16-201ENST00000293778 SIKE1Q9BRV8 207 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 COPG2Q9UBF2 871 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 AAR2Q9Y312 384 aaKnown RBP20.37■□□□□ 0.85
CXCL16-201ENST00000293778 GSC2O15499 205 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 ATP5BP06576 529 aaKnown RBP20.37■□□□□ 0.85
CXCL16-201ENST00000293778 F7P08709 466 aaPredicted RBP20.37■□□□□ 0.85
CXCL16-201ENST00000293778 GRK2P25098 689 aa20.37■□□□□ 0.85
CXCL16-201ENST00000293778 DNAJB2P25686 324 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms