RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RSL24D1Q9UHA3 163 aaKnown RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 HES2Q9Y543 173 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ANKRD63C9JTQ0 380 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 DCXO43602 365 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 GZMAP12544 262 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ARL2P36404 184 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 STARD3Q14849 445 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 TBCELQ5QJ74 424 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 SEL1L3Q68CR1 1132 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 GDF6Q6KF10 455 aaPredicted RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 KCNK18Q7Z418 384 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 MIB1Q86YT6 1006 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ATPAF2Q8N5M1 289 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 LRRC52Q8N7C0 313 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 ZSCAN18Q8TBC5 510 aaPredicted RBP11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 MTERF3Q96E29 417 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 PGLYRP2Q96PD5 576 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC9A7Q96T83 725 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 SIK3Q9Y2K2 1263 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 GRIN2DO15399 1336 aa11.59□□□□□ -0.55
NPC1L1-201ENST00000289547 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TRAV19A0A0A6YYK7 116 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TRPC5OSA6NMA1 111 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 EPHB6O15197 1021 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 PSTPIP1O43586 416 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 SYNCRIPO60506 623 aaKnown RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 AKAP3O75969 853 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 C22orf31O95567 290 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 POLBP06746 335 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 S100A1P23297 94 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 ME2P23368 584 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 RAP1GAPP47736 663 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 EFEMP1Q12805 493 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TTC27Q6P3X3 843 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 ZDHHC17Q8IUH5 632 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TNFRSF25Q93038 417 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 ZNF669Q96BR6 464 aaPredicted RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 DEPDC7Q96QD5 511 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 SEMA6AQ9H2E6 1030 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 DDIT4Q9NX09 232 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 NSMCE4AQ9NXX6 385 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 FAM237BA0A1B0GVD1 139 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TKTL1P51854 596 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 NDST1P52848 882 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TAGAPQ8N103 731 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 SRPK1Q96SB4 655 aaKnown RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 RRM1P23921 792 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 STIP1P31948 543 aaKnown RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 CCR3P51677 355 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 PDK4Q16654 411 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 UGP2Q16851 508 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 AADACL2Q6P093 401 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 ST13P5Q8NFI4 369 aaPredicted RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 MCRS1Q96EZ8 462 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 MRPS26Q9BYN8 205 aaKnown RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 DENND2DQ9H6A0 471 aaPredicted RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TCF7L2Q9NQB0 619 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 DCDC2Q9UHG0 476 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 RBMX2Q9Y388 322 aaKnown RBP11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TSPAN9O75954 239 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 CYP3A5P20815 502 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 FOLH1Q04609 750 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 SLC39A5Q6ZMH5 540 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 ZCCHC23Q6ZST2 131 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 KRT35Q92764 455 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 APOPT1Q96IL0 206 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 C1orf50Q9BV19 199 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 PACSIN3Q9UKS6 424 aa11.58□□□□□ -0.56
NPC1L1-201ENST00000289547 ACAT1P24752 427 aaKnown RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 PKNOX1P55347 436 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 NAA20P61599 178 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 GPM6BQ13491 265 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 DUPD1Q68J44 220 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 TOP6BLQ8N6T0 577 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 NAT14Q8WUY8 206 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 RPRD1AQ96P16 312 aaPredicted RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 REXO4Q9GZR2 422 aaKnown RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 SARS2Q9NP81 518 aaKnown RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 KCNK4Q9NYG8 393 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 M0QYT0 321 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 PSMD3O43242 534 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 B4GALT5O43286 388 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 TSPAN1O60635 241 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 BAIAP3O94812 1187 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 DDHD2O94830 711 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 ALADP13716 330 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CPA3P15088 417 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 PBX1P40424 430 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 GCNT1Q02742 428 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 LPIN1Q14693 890 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 OTUD3Q5T2D3 398 aaPredicted RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 ARMC4Q5T2S8 1044 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 CYP2R1Q6VVX0 501 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 RBM23Q86U06 439 aaKnown RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 C18orf25Q96B23 403 aaPredicted RBP11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 TMEM245Q9H330 911 aa11.57□□□□□ -0.56
NPC1L1-201ENST00000289547 NXF3Q9H4D5 531 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms