RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 KLHL17Q6TDP4 642 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 IL27RAQ6UWB1 636 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 UNC5AQ6ZN44 842 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 IQCKQ8N0W5 287 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 KCTD4Q8WVF5 259 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 PCDHB18PQ96TA0 734 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 CAB39LQ9H9S4 337 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 CCL15-CCL14A0A0B4J2E2 113 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 INSRRP14616 1297 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 CPT1AP50416 773 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 CCL15Q16663 113 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 ALFQ53S48 1182 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 SCIMPQ6UWF3 145 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 CDH24Q86UP0 819 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 CROCCP3Q8IVE0 287 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 HGH1Q9BTY7 390 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 TKTL2Q9H0I9 626 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 EPS8L2Q9H6S3 715 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 GTF2A1LQ9UNN4 478 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM50BQ9Y247 325 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 NCF4Q15080 339 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 PFKFB4Q16877 469 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 ERLEC1Q96DZ1 483 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 NPAS2Q99743 824 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 KLHL20Q9Y2M5 609 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 PCDHAC2Q9Y5I4 1007 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 LOC100506127A0A0U1RQW1 187 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 FBXO21O94952 628 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 RHOCP08134 193 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 MBL2P11226 248 aaPredicted RBP15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 FEN1P39748 380 aaKnown RBP15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 ALDH9A1P49189 494 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 PEX6Q13608 980 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 MARC1Q5VT66 337 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 VN1R5Q7Z5H4 357 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 C10orf53Q8N6V4 93 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM13CQ8NE31 585 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 PGLYRP2Q96PD5 576 aa15.58■□□□□ 0.09
SHROOM4-201ENST00000289292 hCG_1818297A0A087WSY0 165 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 RGS21Q2M5E4 152 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 PDZK1Q5T2W1 519 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 BRSK2Q8IWQ3 736 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 ZNF614Q8N883 585 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 SPATA16Q9BXB7 569 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 SPRTNQ9H040 489 aaPredicted RBP15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 DMAP1Q9NPF5 467 aaPredicted RBP15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 SPATA31A5Q5VU36 1347 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 SPATA31A7Q8IWB4 1347 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 A0A087X1B8 175 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 STK25O00506 426 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 EIF4BP23588 611 aaKnown RBP15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 SLC5A9Q2M3M2 681 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 ECHDC2Q86YB7 292 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 COG5Q9UP83 839 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 COMMD3-BMI1R4GMX3 469 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 PIPSLA2A3N6 862 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 DSG3P32926 999 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 RHOAP61586 193 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 COX10Q12887 443 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 SLC1A5Q15758 541 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 FNBP1LQ5T0N5 605 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 VPS28Q9UK41 221 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 R3HDM2Q9Y2K5 976 aaKnown RBP15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 ACTL7BQ9Y614 415 aa15.58■□□□□ 0.08
SHROOM4-201ENST00000289292 SRRM3A6NNA2 597 aaPredicted RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 MEIS2O14770 477 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 EDF1O60869 148 aaKnown RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ITGAVP06756 1048 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ABHD2P08910 425 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 IL12RB1P42701 662 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 CLK2P49760 499 aaKnown RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 NEK3P51956 506 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 FRG1Q14331 258 aaKnown RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 VPS72Q15906 364 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ARMCX6Q7L4S7 300 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 UXS1Q8NBZ7 420 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 SYT15Q9BQS2 421 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 DPPA5A6NC42 116 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 SIGLEC16A6NMB1 481 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 PSMD10O75832 226 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ZBTB11O95625 1053 aaPredicted RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 CDK7P50613 346 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 GALK1P51570 392 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 DGKZQ13574 1117 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 FASTKD3Q14CZ7 662 aaKnown RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ZNF57Q68EA5 555 aaPredicted RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 TRABD2AQ86V40 505 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 C4orf32Q8N8J7 132 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 METTL6Q8TCB7 284 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 TUBGCP4Q9UGJ1 667 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 KLHL3Q9UH77 587 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ANAPC2Q9UJX6 822 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 AP4B1Q9Y6B7 739 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 THP07101 528 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 SERPINA6P08185 405 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 YWHAZP63104 245 aaKnown RBP15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 ARSHQ5FYA8 562 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 FAM45BPQ6NSW5 357 aa15.57■□□□□ 0.08
SHROOM4-201ENST00000289292 GLT6D1Q7Z4J2 308 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms