RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PDE1CQ14123 709 aaPredicted RBP19.69■□□□□ 0.74
BRAF-201ENST00000288602 PPP2R5DQ14738 602 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 TCTN1Q2MV58 587 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 HSP90AA5PQ58FG0 334 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 ZNF449Q6P9G9 518 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 SLC43A3Q8NBI5 491 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 NAT9Q9BTE0 207 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 TRIM62Q9BVG3 475 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 TRIM55Q9BYV6 548 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 HAO1Q9UJM8 370 aa19.69■□□□□ 0.74
BRAF-201ENST00000288602 ZCWPW2A0A1B0GU75 182 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 ENPP3O14638 875 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 MTSS1O43312 755 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 MAFKO60675 156 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 ZNF135P52742 658 aaPredicted RBP19.68■□□□□ 0.74
BRAF-201ENST00000288602 CCDC15Q0P6D6 951 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 BST1Q10588 318 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 TAF1BQ53T94 588 aaPredicted RBP19.68■□□□□ 0.74
BRAF-201ENST00000288602 PIK3R6Q5UE93 754 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 MANEALQ5VSG8 457 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 ICE2Q659A1 982 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 BEND5Q7L4P6 421 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 CMC1Q7Z7K0 106 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 NUDCD3Q8IVD9 361 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.68■□□□□ 0.74
BRAF-201ENST00000288602 TBC1D31Q96DN5 1066 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 C20orf27Q9GZN8 174 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 KCNK13Q9HB14 408 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 TXNDC16Q9P2K2 825 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 KCNU1A8MYU2 1149 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 CBX6O95503 412 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 NQO1P15559 274 aaKnown RBP19.68■□□□□ 0.74
BRAF-201ENST00000288602 GTF2A1P52655 376 aaPredicted RBP19.68■□□□□ 0.74
BRAF-201ENST00000288602 EFEMP1Q12805 493 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 ANKRD20A4Q4UJ75 823 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 SPANXN3Q5MJ09 141 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 RSPO2Q6UXX9 243 aaPredicted RBP19.68■□□□□ 0.74
BRAF-201ENST00000288602 TFAP2DQ7Z6R9 452 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 CRISPLD1Q9H336 500 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 TMEM161AQ9NX61 479 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 ADAM28Q9UKQ2 775 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 STK38LQ9Y2H1 464 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 PCDHB7Q9Y5E2 793 aa19.68■□□□□ 0.74
BRAF-201ENST00000288602 FAM237BA0A1B0GVD1 139 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 TMEM189-UBE2V1I3L0A0 370 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 DCTN3O75935 186 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 UNC5CO95185 931 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 KRT16P08779 473 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 KITP10721 976 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 SELPP16109 830 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 CYP2C18P33260 490 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 TIFABQ6ZNK6 161 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 TMEM135Q86UB9 458 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 MON1AQ86VX9 555 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 PARP9Q8IXQ6 854 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 PXYLP1Q8TE99 480 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 E2F7Q96AV8 911 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 VAT1Q99536 393 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 TSEN34Q9BSV6 310 aaKnown RBP19.67■□□□□ 0.74
BRAF-201ENST00000288602 MARCOQ9UEW3 520 aaPredicted RBP19.67■□□□□ 0.74
BRAF-201ENST00000288602 PCDHB5Q9Y5E4 795 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 C2CD2LO14523 706 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 HMBSP08397 361 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 NMBRP28336 390 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 N4BP2L1Q5TBK1 243 aaPredicted RBP19.67■□□□□ 0.74
BRAF-201ENST00000288602 STRA8Q7Z7C7 330 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 TMEM173Q86WV6 379 aaPredicted RBP19.67■□□□□ 0.74
BRAF-201ENST00000288602 MIB1Q86YT6 1006 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 IPMKQ8NFU5 416 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 TMEM120AQ9BXJ8 343 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 CATSPERBQ9H7T0 1116 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 ZNF358Q9NW07 568 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 EMCNQ9ULC0 261 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 SCML2Q9UQR0 700 aa19.67■□□□□ 0.74
BRAF-201ENST00000288602 NYNRINQ9P2P1 1898 aaKnown RBP19.67■□□□□ 0.74
BRAF-201ENST00000288602 DLDP09622 509 aaKnown RBP19.66■□□□□ 0.74
BRAF-201ENST00000288602 CPB1P15086 417 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 CCNCP24863 283 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 CNTFP26441 200 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 NFE2Q16621 373 aaPredicted RBP19.66■□□□□ 0.74
BRAF-201ENST00000288602 ASRGL1Q7L266 308 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 SH3TC2Q8TF17 1288 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 APBB2Q92870 758 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 PRR11Q96HE9 360 aaPredicted RBP19.66■□□□□ 0.74
BRAF-201ENST00000288602 SERPINB11Q96P15 392 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 ATXN3LQ9H3M9 355 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 CAB39LQ9H9S4 337 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 FBXO6Q9NRD1 293 aaPredicted RBP19.66■□□□□ 0.74
BRAF-201ENST00000288602 MKS1Q9NXB0 559 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 HEY2Q9UBP5 337 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 ZFP69BQ9UJL9 534 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 A8MUI8 341 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 T-ENOLP0DO92 83 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 PAPOLAP51003 745 aaKnown RBP19.66■□□□□ 0.74
BRAF-201ENST00000288602 ARFIP2P53365 341 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 PGGT1BP53609 377 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 COG7P83436 770 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 PSMD5Q16401 504 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 CASD1Q96PB1 797 aa19.66■□□□□ 0.74
BRAF-201ENST00000288602 SEPT5Q99719 369 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms