RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 MDC1Q14676 2089 aaKnown RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 CLOCKO15516 846 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 MYL12AP19105 171 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 PDPK2PQ6A1A2 396 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 ZDHHC13Q8IUH4 622 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 C12orf56Q8IXR9 622 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 DEFB107AQ8IZN7 70 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 GMCL1P1Q8NEA9 526 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 MTMR8Q96EF0 704 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 PUS3Q9BZE2 481 aaKnown RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 AHSPQ9NZD4 102 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 TNFSF13BQ9Y275 285 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 IRAK3Q9Y616 596 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 UBTFL6P0CB48 400 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 ADSSP30520 456 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 LRRC70Q7Z2Q7 622 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 TBC1D21Q8IYX1 336 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 EID3Q8N140 333 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 BCL7BQ9BQE9 202 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 XRN1Q8IZH2 1706 aaKnown RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 RHPN2P1A8MT19 583 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 NUDT14O95848 222 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 ENO3P13929 434 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 EIF2B2P49770 351 aaKnown RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 SMIM11AP58511 58 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 ACSM2AQ08AH3 577 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 SQLEQ14534 574 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 INO80DQ53TQ3 878 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 PTRHD1Q6GMV3 140 aaKnown RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 RNF135Q8IUD6 432 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 CNTD1Q8N815 330 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 RNF25Q96BH1 459 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 PGBD4Q96DM1 585 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 AIM2O14862 343 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 ATP6V1B1P15313 513 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 ZNF211Q13398 564 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 FAM220AQ7Z4H9 259 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 RBM12BQ8IXT5 1001 aaKnown RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 DRAXINQ8NBI3 349 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 SLC35C1Q96A29 364 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 FAM53CQ9NYF3 392 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 RPS6KL1Q9Y6S9 549 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 M0QYV0 167 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 CCNB1P14635 433 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 GPD1P21695 349 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 PEX3P56589 373 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 COLEC12Q5KU26 742 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 ADGRG6Q86SQ4 1221 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 NEK7Q8TDX7 302 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 TMCO6Q96DC7 493 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 TRIM39Q9HCM9 518 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 TMEM216Q9P0N5 145 aa8.53□□□□□ -1.04
CACNA1D-201ENST00000288139 CACNA1DQ01668 2161 aa8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 CDH17Q12864 832 aa8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 AUHQ13825 339 aaKnown RBP8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 CLNKQ7Z7G1 428 aa8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 ZNF614Q8N883 585 aa8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 TBATAQ96M53 351 aa8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 RIOX1Q9H6W3 641 aa8.52□□□□□ -1.04
CACNA1D-201ENST00000288139 CEP250Q9BV73 2442 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 ANKRD65E5RJM6 399 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 CST8O60676 142 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 STARP49675 285 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 EPHA10Q5JZY3 1008 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 MTFR2Q6P444 385 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 RIT1Q92963 219 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 IL22Q9GZX6 179 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 FER1L4A9Z1Z3 1794 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 TYSND1Q2T9J0 566 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 C6orf52Q5T4I8 152 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 ABRAQ8N0Z2 381 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 MCOLN3Q8TDD5 553 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 POLR3FQ9H1D9 316 aaPredicted RBP8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 TASP1Q9H6P5 420 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 RASSF1Q9NS23 344 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 GIN1Q9NXP7 522 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 BTG4Q9NY30 223 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 CRYL1Q9Y2S2 319 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 A0A087WWV3 80 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 EDF1O60869 148 aaKnown RBP8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 TULP3O75386 442 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 VPS26AO75436 327 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 PDGFRAP16234 1089 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 DDR2Q16832 855 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 TNFAIP8L3Q5GJ75 292 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 STXBP5Q5T5C0 1151 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 KLHL17Q6TDP4 642 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 TMEM139Q8IV31 216 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 STK40Q8N2I9 435 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 ETNPPLQ8TBG4 499 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 FAM84AQ96KN4 292 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 RMI1Q9H9A7 625 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 THG1LQ9NWX6 298 aaKnown RBP8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 TBX20Q9UMR3 447 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 STX16-NPEPL1H3BU86 382 aa8.52□□□□□ -1.05
CACNA1D-201ENST00000288139 STX16O14662 325 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms