RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SOWAHBA6NEL2 793 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 CHADO15335 359 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 PAPSS1O43252 624 aaPredicted RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 FGFR3P22607 806 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 GP5P40197 560 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 SCNN1BP51168 640 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 CHN2P52757 468 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 SLC27A1Q6PCB7 646 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 PLEKHM3Q6ZWE6 761 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TFAP2DQ7Z6R9 452 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 CDH24Q86UP0 819 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 EFHBQ8N7U6 833 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 FBXL18Q96ME1 805 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 SEPHS2Q99611 448 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 ECSITQ9BQ95 431 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 CAB39LQ9H9S4 337 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TUBGCP4Q9UGJ1 667 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 PLA2G4CQ9UP65 541 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 MYH1P12882 1939 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TSPAN3O60637 253 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 HSMCR30P0CW71 290 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 NELFEP18615 380 aaKnown RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 ST13P50502 369 aaKnown RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 BEX3Q00994 111 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 RBBP7Q16576 425 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 UNC5AQ6ZN44 842 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 FAM162AQ96A26 154 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 LRMDAQ9H2I8 198 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 NXF3Q9H4D5 531 aaKnown RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 USE1Q9NZ43 259 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 ITGB4P16144 1822 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 CNTNAP1P78357 1384 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 AGRPO00253 132 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 SERPINE1P05121 402 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 BLMHQ13867 455 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 NOMO1Q15155 1222 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 CA9Q16790 459 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TBCELQ5QJ74 424 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 MAP1SQ66K74 1059 aaPredicted RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 SEL1L3Q68CR1 1132 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 C4orf22Q6V702 233 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 RRM2BQ7LG56 351 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TAS1R3Q7RTX0 852 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 MAGEB5Q9BZ81 275 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 C6orf62Q9GZU0 229 aaPredicted RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 SPTLC1O15269 473 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 NAGLUP54802 743 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 UGP2Q16851 508 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 PPM1JQ5JR12 505 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 RFWD3Q6PCD5 774 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TAS2R42Q7RTR8 314 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 DEPDC7Q96QD5 511 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 EBNA1BP2Q99848 306 aaKnown RBP12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 PNPOQ9NVS9 261 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 LRFN2Q9ULH4 789 aa12.78□□□□□ -0.36
SLC6A1-201ENST00000287766 TMEM247A6NEH6 219 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 RRN3P2A6NIE6 340 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 ALOX12P18054 663 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 ATP6V1B2P21281 511 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 IFNA8P32881 189 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 MTTPP55157 894 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 KCNK10P57789 538 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 SFSWAPQ12872 951 aaKnown RBP12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 PEX6Q13608 980 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 RGS21Q2M5E4 152 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 AGKQ53H12 422 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 SAPCD2Q86UD0 394 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 EGFL6Q8IUX8 553 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 PIWIL2Q8TC59 973 aaKnown RBP12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 BLOC1S5Q8TDH9 187 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 PHF21AQ96BD5 680 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 DGCR6LQ9BY27 220 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 COPG2Q9UBF2 871 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 LGALS13Q9UHV8 139 aa12.77□□□□□ -0.36
SLC6A1-201ENST00000287766 ADGRA2Q96PE1 1338 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 SMIM31A0A1B0GVY4 71 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 TSPAN9O75954 239 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 PCSK1P29120 753 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 GRIA1P42261 906 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 PTAR1Q7Z6K3 402 aaPredicted RBP12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 KCNMB4Q86W47 210 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 SNX32Q86XE0 403 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 CCNJLQ8IV13 435 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 CLEC4CQ8WTT0 213 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 ABHD8Q96I13 439 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 SMAD5Q99717 465 aaKnown RBP12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 OMDQ99983 421 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 SLC12A4Q9UP95 1085 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 UBR2Q8IWV8 1755 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 CILPO75339 1184 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 TNFRSF21O75509 655 aa12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
SLC6A1-201ENST00000287766 PTPN7P35236 360 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms