RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 NUP205Q92621 2012 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 AMHP03971 560 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SPATA31D3P0C874 917 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SMIM18P0DKX4 95 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 THRAP10827 490 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 EPHA3P29320 983 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 MSX2P35548 267 aaPredicted RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 GNL1P36915 607 aaPredicted RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 ACADSBP45954 432 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 THOP1P52888 689 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 RPL26P61254 145 aaKnown RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 MRPS22P82650 360 aaKnown RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 LSAMPQ13449 338 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 LAMB3Q13751 1172 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 C9orf57Q5W0N0 161 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 SPATA31D4Q6ZUB0 917 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 LRRC52Q8N7C0 313 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 BEST2Q8NFU1 509 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 EIF2AQ9BY44 585 aaKnown RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 ILKAPQ9H0C8 392 aaPredicted RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 BFARQ9NZS9 450 aa13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 C6orf203Q9P0P8 240 aaPredicted RBP13.51□□□□□ -0.25
SLC28A1-201ENST00000286749 EEF2KO00418 725 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 IRF6O14896 467 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 XRCC1P18887 633 aaPredicted RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PTPN3P26045 913 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 TKTP29401 623 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PMLP29590 882 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PGGT1BP53609 377 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 NME3Q13232 169 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 LSM12Q3MHD2 195 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 CERCAMQ5T4B2 595 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 TMEM135Q86UB9 458 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 SPATA24Q86W54 205 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PSTKQ8IV42 348 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 DSELQ8IZU8 1212 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 KYQ8NBH2 561 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PIP4K2CQ8TBX8 421 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 OTUD5Q96G74 571 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 CDRT15Q96T59 188 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 APOL2Q9BQE5 337 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 OXSMQ9NWU1 459 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 CLIC5Q9NZA1 410 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PPP1R1BQ9UD71 204 aaPredicted RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PRPF19Q9UMS4 504 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PPP2R3BQ9Y5P8 575 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 TK2O00142 265 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 MATN2O00339 956 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 ATP9BO43861 1147 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 AP2A1O95782 977 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PKNOX1P55347 436 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 TMEM62Q0P6H9 643 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 MPP3Q13368 585 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 DPYSQ14117 519 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 FLOT2Q14254 428 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PAFAH1B3Q15102 231 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 C16orf89Q6UX73 402 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 BNC2Q6ZN30 1099 aaPredicted RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PIGZQ86VD9 579 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 CRYBG2Q8N1P7 616 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 RCN3Q96D15 328 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 NMD3Q96D46 503 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 HSFY1Q96LI6 401 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 SERPINI1Q99574 410 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 ACE2Q9BYF1 805 aaPredicted RBP13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 UBAP1Q9NZ09 502 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 RBPJLQ9UBG7 517 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PCDHGB4Q9UN71 923 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 DERAQ9Y315 318 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 PCDHGB5Q9Y5G0 923 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 CSADQ9Y600 493 aa13.5□□□□□ -0.25
SLC28A1-201ENST00000286749 SMIM31A0A1B0GVY4 71 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 RGSL1A5PLK6 1076 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 M0QYT0 321 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CFLARO15519 480 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 AP1G1O43747 822 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 DNAJA2O60884 412 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 H2AFYO75367 372 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 SAT1P21673 171 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CNGA3Q16281 694 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 KIZQ2M2Z5 673 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 DCAF4L1Q3SXM0 396 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 SEL1L3Q68CR1 1132 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 MARVELD2Q8N4S9 558 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 RNF148Q8N7C7 305 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 USP13Q92995 863 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 VPS39Q96JC1 886 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 LRGUKQ96M69 825 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 EPAS1Q99814 870 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 NUF2Q9BZD4 464 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 TASP1Q9H6P5 420 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 ELP3Q9H9T3 547 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms