RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SYCP2LQ5T4T6 812 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 ZNF776Q68DI1 518 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 SND1Q7KZF4 910 aaKnown RBP eCLIP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 MON1BQ7L1V2 547 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 RABEPKQ7Z6M1 372 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 PHF13Q86YI8 300 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 PTPRN2Q92932 1015 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 C1orf74Q96LT6 269 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 NUP58Q9BVL2 599 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 MIR1-1HGQ9H1L0 117 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 CBX8Q9HC52 389 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 MPP6Q9NZW5 540 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 ADAM22Q9P0K1 906 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 EIF2B4Q9UI10 523 aaKnown RBP14.84□□□□□ -0.03
HMGN3-201ENST00000275036 TBC1D30Q9Y2I9 924 aa14.84□□□□□ -0.03
HMGN3-201ENST00000275036 IGLV3-10A0A075B6K4 115 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.83□□□□□ -0.04
HMGN3-201ENST00000275036 TCRBV5S1A1TA0A578 114 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 E9PAM4 449 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 CEACAM1P13688 526 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 FERP16591 822 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 RFC1P35251 1148 aaPredicted RBP14.83□□□□□ -0.04
HMGN3-201ENST00000275036 FAM193AP78312 1265 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 ZBTB16Q05516 673 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 ZNF177Q13360 481 aaPredicted RBP14.83□□□□□ -0.04
HMGN3-201ENST00000275036 CDO1Q16878 200 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 E4F1Q66K89 784 aaPredicted RBP14.83□□□□□ -0.04
HMGN3-201ENST00000275036 FRS2Q8WU20 508 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 FAM129BQ96TA1 746 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 PSMB7Q99436 277 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 ORAI3Q9BRQ5 295 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 MAGEB5Q9BZ81 275 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 IL21RQ9HBE5 538 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 SEPT11Q9NVA2 429 aaKnown RBP14.83□□□□□ -0.04
HMGN3-201ENST00000275036 DNAAF2Q9NVR5 837 aaKnown RBP14.83□□□□□ -0.04
HMGN3-201ENST00000275036 ZNF212Q9UDV6 495 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.83□□□□□ -0.04
HMGN3-201ENST00000275036 PAXBP1Q9Y5B6 917 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 WDFY3Q8IZQ1 3526 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 FRYQ5TBA9 3013 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 ZFHX4Q86UP3 3567 aa14.83□□□□□ -0.04
HMGN3-201ENST00000275036 EDDM13A0A1B0GTR0 161 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 A0A1B0GTW7 788 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 TARSL2A2RTX5 802 aaKnown RBP14.82□□□□□ -0.04
HMGN3-201ENST00000275036 LRRC53A6NM62 1247 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 C10orf142B7Z368 130 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 SEMA4FO95754 770 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 DNTTP04053 509 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 SPINK2P20155 84 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 PTPN9P43378 593 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 METAP1P53582 386 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 OXCT1P55809 520 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 SHC2P98077 582 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 SULT2A1Q06520 285 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 NR1I3Q14994 352 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 RNF219Q5W0B1 726 aaPredicted RBP14.82□□□□□ -0.04
HMGN3-201ENST00000275036 TFAP2DQ7Z6R9 452 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 LUZP1Q86V48 1076 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 MMAAQ8IVH4 418 aaKnown RBP14.82□□□□□ -0.04
HMGN3-201ENST00000275036 STK40Q8N2I9 435 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 C3orf20Q8ND61 904 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 CENPIQ92674 756 aaPredicted RBP14.82□□□□□ -0.04
HMGN3-201ENST00000275036 HAPLN3Q96S86 360 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 TTYH3Q9C0H2 523 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 PABPC3Q9H361 631 aaKnown RBP14.82□□□□□ -0.04
HMGN3-201ENST00000275036 TAS2R14Q9NYV8 317 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 SUSD2Q9UGT4 822 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 ANGPTL2Q9UKU9 493 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 MYO6Q9UM54 1294 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 USP24Q9UPU5 2620 aa14.82□□□□□ -0.04
HMGN3-201ENST00000275036 A0A0D9SEW6 157 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 SPAARA0A1B0GVQ0 90 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 A0A1W2PQC6 194 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 UPK3BL1B0FP48 263 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 UPK3BL2E5RIL1 263 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 MID1O15344 667 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 SNAP91O60641 907 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 OPHN1O60890 802 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 SRGAP2O75044 1071 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 CALB1P05937 261 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 IGHV4-34P06331 123 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 RHOCP08134 193 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 KRT3P12035 628 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 GNSP15586 552 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 SDC4P31431 198 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 VASPP50552 380 aaPredicted RBP14.81□□□□□ -0.04
HMGN3-201ENST00000275036 ATXN3P54252 364 aaPredicted RBP14.81□□□□□ -0.04
HMGN3-201ENST00000275036 HDAC4P56524 1084 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 CST6Q15828 149 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 TTC31Q49AM3 519 aaPredicted RBP14.81□□□□□ -0.04
HMGN3-201ENST00000275036 FILIP1LQ4L180 1135 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 ACAD10Q6JQN1 1059 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 WDR59Q6PJI9 974 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 LAYNQ6UX15 382 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 LRRC31Q6UY01 552 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 STRADAQ7RTN6 431 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 AADATQ8N5Z0 425 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 SNX19Q92543 992 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 BIRC7Q96CA5 298 aa14.81□□□□□ -0.04
HMGN3-201ENST00000275036 CAMK1GQ96NX5 476 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms