RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ATP6AP1LQ52LC2 224 aa11.76□□□□□ -0.53
VPS33A-201ENST00000267199 RSBN1Q5VWQ0 802 aaPredicted RBP11.76□□□□□ -0.53
VPS33A-201ENST00000267199 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
VPS33A-201ENST00000267199 OR52K1Q8NGK4 314 aa11.76□□□□□ -0.53
VPS33A-201ENST00000267199 NKD2Q969F2 451 aaPredicted RBP11.76□□□□□ -0.53
VPS33A-201ENST00000267199 KCTD14Q9BQ13 255 aaPredicted RBP11.76□□□□□ -0.53
VPS33A-201ENST00000267199 KATNAL1Q9BW62 490 aa11.76□□□□□ -0.53
VPS33A-201ENST00000267199 HPS4Q9NQG7 708 aa11.76□□□□□ -0.53
VPS33A-201ENST00000267199 TDRKHQ9Y2W6 561 aaKnown RBP11.76□□□□□ -0.53
VPS33A-201ENST00000267199 SLIT2O94813 1529 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 RGSL1A5PLK6 1076 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 CDKN2BP42772 138 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 GEMP55040 296 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 JAG1P78504 1218 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 RUNX1T1Q06455 604 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 LPIN1Q14693 890 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 RGS21Q2M5E4 152 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 SAMD4BQ5PRF9 694 aaKnown RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 GJC2Q5T442 439 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 UNC5AQ6ZN44 842 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 HORMAD1Q86X24 394 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 ZDHHC17Q8IUH5 632 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PARP8Q8N3A8 854 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 KLHL23Q8NBE8 558 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 DLG3Q92796 817 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 FICDQ9BVA6 458 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 RMI1Q9H9A7 625 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 APOBEC3GQ9HC16 384 aaKnown RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 ATAD3AQ9NVI7 634 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 ABI2Q9NYB9 513 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 SELENONQ9NZV5 590 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 SLC7A8Q9UHI5 535 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 CDH22Q9UJ99 828 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PSMD13Q9UNM6 376 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 SATB2Q9UPW6 733 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PLLPQ9Y342 182 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 RBMX2Q9Y388 322 aaKnown RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PSMD12O00232 456 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 MAGEC1O60732 1142 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 HSMCR30P0CW71 290 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 UNGP13051 313 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 SLC27A1Q6PCB7 646 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 ARCQ7LC44 396 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 CROCCP3Q8IVE0 287 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 SLC44A1Q8WWI5 657 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 NSMCE2Q96MF7 247 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 CIB1Q99828 191 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 APOL5Q9BWW9 433 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 SPATA16Q9BXB7 569 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 C6orf203Q9P0P8 240 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 GOLGA4Q13439 2230 aaKnown RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PIK3R1P27986 724 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PSMB4P28070 264 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 CSE1LP55060 971 aaKnown RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 LRRC74AQ0VAA2 488 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 MTX3Q5HYI7 312 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 ZC3H12BQ5HYM0 836 aaKnown RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF554Q86TJ5 538 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PPP1R13LQ8WUF5 828 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 NPAS2Q99743 824 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 C6orf62Q9GZU0 229 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 DMTF1Q9Y222 760 aa11.75□□□□□ -0.53
VPS33A-201ENST00000267199 PRG3Q9Y2Y8 225 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-201ENST00000267199 CYP1A1P04798 512 aaPredicted RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 LGALS2P05162 132 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ATP5BP06576 529 aaKnown RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 LINGO3P0C6S8 592 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 PSEN1P49768 467 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 PTP4A2Q12974 167 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 MPP2Q14168 576 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 HSDL1Q3SXM5 330 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ZNF470Q6ECI4 717 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CHSY1Q86X52 802 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 DDX43Q9NXZ2 648 aaKnown RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 NDUFAF1Q9Y375 327 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 A0A0A0MRY4 1105 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 DYTNA2CJ06 578 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 AGRPO00253 132 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 RECQL4O94761 1208 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 ITGA2BP08514 1039 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 GRIA4P48058 902 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 KLF10Q13118 480 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 VGLL4Q14135 290 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 KRT72Q14CN4 511 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CELF3Q5SZQ8 465 aaKnown RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 LRRC8DQ7L1W4 858 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 HASPINQ8TF76 798 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 DNAJB3Q8WWF6 145 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 FIG4Q92562 907 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 FAXDC2Q96IV6 333 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 SERAC1Q96JX3 654 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 SPATA13Q96N96 652 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 PARK7Q99497 189 aaKnown RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 CPNE1Q99829 537 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 EBNA1BP2Q99848 306 aaKnown RBP11.74□□□□□ -0.53
VPS33A-201ENST00000267199 SH3GL1Q99961 368 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 EBF4Q9BQW3 602 aa11.74□□□□□ -0.53
VPS33A-201ENST00000267199 EGFL7Q9UHF1 273 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms