RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SHOX2O60902 331 aaPredicted RBP17.02■□□□□ 0.32
PHRF1-201ENST00000264555 MAPK1P28482 360 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 ATP5C1P36542 298 aaKnown RBP17.02■□□□□ 0.32
PHRF1-201ENST00000264555 P2RY11Q96G91 374 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 ASB2Q96Q27 587 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 APPL1Q9UKG1 709 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.32
PHRF1-201ENST00000264555 A0A1W2PPM1 405 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 NFKBIEO00221 500 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 DCXO43602 365 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 PLD1Q13393 1074 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 CYP1B1Q16678 543 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 RGMBQ6NW40 437 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 ADCK2Q7Z695 626 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 PLD5Q8N7P1 536 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 FBXL18Q96ME1 805 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 CSPG4P5Q96PW8 444 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 CCT7Q99832 543 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 POMKQ9H5K3 350 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 SNX13Q9Y5W8 968 aa17.02■□□□□ 0.31
PHRF1-201ENST00000264555 MYO1GB0I1T2 1018 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 BST1Q10588 318 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ZYG11BQ9C0D3 744 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 COG4Q9H9E3 785 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 PIAS1O75925 651 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ITGA2BP08514 1039 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ANKS3Q6ZW76 656 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 POU5F2Q8N7G0 328 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 STK32AQ8WU08 396 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 LRRN4Q8WUT4 740 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 FTHL17Q9BXU8 183 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 PRDM4Q9UKN5 801 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 MYH2Q9UKX2 1941 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 TPST1O60507 370 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 PIGNO95427 931 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ZNF7P17097 686 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 SLC26A9Q7LBE3 791 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ZC3H3Q8IXZ2 948 aaKnown RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 VPS50Q96JG6 964 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 RMND5AQ9H871 391 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 BCLAF3A2AJT9 711 aaKnown RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 HNRNPRO43390 633 aaKnown RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 CYP3A5P20815 502 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 CCDC15Q0P6D6 951 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ANKS6Q68DC2 871 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 DRICH1Q6PGQ1 229 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 IZUMO2Q6UXV1 221 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 RRM2BQ7LG56 351 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 OR9Q1Q8NGQ5 310 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 CPT1BQ92523 772 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 NMRK1Q9NWW6 199 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 SMPD4Q9NXE4 827 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 UTP6Q9NYH9 597 aaKnown RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 V9GYQ6 96 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 CNTNAP1P78357 1384 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 MDM4O15151 490 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 SKIV2L2P42285 1042 aaKnown RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 POU5F1Q01860 360 aaKnown RBP17.01■□□□□ 0.31
PHRF1-201ENST00000264555 ZNF284Q2VY69 593 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 CNBD2Q96M20 576 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 POLG2Q9UHN1 485 aa17.01■□□□□ 0.31
PHRF1-201ENST00000264555 GLTPD2A6NH11 291 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 FZD9O00144 591 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 SERPIND1P05546 499 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 TPSB2P20231 275 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 HOXD13P35453 343 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 TPSAB1Q15661 275 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 BRMS1LQ5PSV4 323 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 SNX30Q5VWJ9 437 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 ZNF516Q92618 1163 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 CYLDQ9NQC7 956 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 SF3B1O75533 1304 aaKnown RBP eCLIP17■□□□□ 0.311e-8■■■■■ 140.7
PHRF1-201ENST00000264555 EDF1O60869 148 aaKnown RBP17■□□□□ 0.31
PHRF1-201ENST00000264555 MZF1P28698 734 aaPredicted RBP17■□□□□ 0.31
PHRF1-201ENST00000264555 ADRA1BP35368 520 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 ABCG1P45844 678 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 PMF1Q6P1K2 205 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 DACT3Q96B18 629 aaPredicted RBP17■□□□□ 0.31
PHRF1-201ENST00000264555 SPATA16Q9BXB7 569 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 GOLGA2P5Q9HBQ8 144 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 MID1IP1Q9NPA3 183 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 MEI4A8MW99 385 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 ADCY6O43306 1168 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 ALBP02768 609 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 CD86P42081 329 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 XRN2Q9H0D6 950 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■□□□ 13.6
PHRF1-201ENST00000264555 SLCO1B3Q9NPD5 702 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 SYBUQ9NX95 663 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 C22orf31O95567 290 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 MT-CO1P00395 513 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 MYL4P12829 197 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 PTPN9P43378 593 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 ATP6AP1LQ52LC2 224 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 RAP1GAP2Q684P5 730 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 SLC44A1Q8WWI5 657 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 LZICQ8WZA0 190 aa17■□□□□ 0.31
PHRF1-201ENST00000264555 GRHL1Q9NZI5 618 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms