RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GPR180Q86V85 440 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 CLVS1Q8IUQ0 354 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 LZTR1Q8N653 840 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 PACRGLQ8N7B6 248 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 SLC7A14Q8TBB6 771 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ADAMTS16Q8TE57 1224 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 ITPKCQ96DU7 683 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 THAP11Q96EK4 314 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 OXCT2Q9BYC2 517 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 C2orf40Q9H1Z8 148 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 LRRC40Q9H9A6 602 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 C20orf96Q9NUD7 363 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 MTMR10Q9NXD2 777 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 SLC17A6Q9P2U8 582 aa12.63□□□□□ -0.39
CHMP2B-201ENST00000263780 TRIM64CA6NLI5 447 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 TRPC5OSA6NMA1 111 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 PRKCBP05771 671 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 HSPA1AP0DMV8 641 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 HSPA1BP0DMV9 641 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 MSX2P35548 267 aaPredicted RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 MLH1P40692 756 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 STT3AP46977 705 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 NDST2P52849 883 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 PSME3P61289 254 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 GBE1Q04446 702 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 ZYG11AQ6WRX3 759 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 CLEC14AQ86T13 490 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 DQX1Q8TE96 717 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 ATP6V1E2Q96A05 226 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 ISOC1Q96CN7 298 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 PGBD4Q96DM1 585 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 TMEM165Q9HC07 324 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF358Q9NW07 568 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 SIP14410 1827 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 CNTNAP1P78357 1384 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 RGS20O76081 388 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 ERVK-10P10266 1014 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 HSPA8P11142 646 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 MPSTP25325 297 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 DNAJB1P25685 340 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 CSE1LP55060 971 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 NAA20P61599 178 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 MTA1Q13330 715 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 CA9Q16790 459 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 IER5Q5VY09 327 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 MPZL3Q6UWV2 235 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 MAMDC4Q6UXC1 1216 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 ZBTB49Q6ZSB9 765 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 STRA8Q7Z7C7 330 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 CMC1Q7Z7K0 106 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 FAM83AQ86UY5 434 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 EXOC8Q8IYI6 725 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 RNF148Q8N7C7 305 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 URGCPQ8TCY9 931 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 AGAP3Q96P47 875 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 RPF1Q9H9Y2 349 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 LIN28AQ9H9Z2 209 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 PALMDQ9NP74 551 aa12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 TDRKHQ9Y2W6 561 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-201ENST00000263780 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 HEATR9A2RTY3 570 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 PAPSS1O43252 624 aaPredicted RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 GRID2O43424 1007 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 HTRA2O43464 458 aaPredicted RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 CRADDP78560 199 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 MXD4Q14582 209 aaPredicted RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 PPP4R4Q6NUP7 873 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 ZDHHC17Q8IUH5 632 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 FIBCD1Q8N539 461 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 ANKFN1Q8N957 763 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 AGR3Q8TD06 166 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 MAF1Q9H063 256 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 PFDN4Q9NQP4 134 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 GGA3Q9NZ52 723 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 TLK1Q9UKI8 766 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 SNX13Q9Y5W8 968 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 GAS2O43903 313 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 GRAP2O75791 330 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 PIGNO95427 931 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 PTPN1P18031 435 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 GRIA4P48058 902 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 C21orf59P57076 290 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 SLC6A3Q01959 620 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 RELAQ04206 551 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 ORC1Q13415 861 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 RAB6CQ53S08 254 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms