RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
TRAF4-202ENST00000262396 RRN3Q9NYV6 651 aa12.6□□□□□ -0.39
TRAF4-202ENST00000262396 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAF4-202ENST00000262396 ADAMTS1Q9UHI8 967 aa12.6□□□□□ -0.39
TRAF4-202ENST00000262396 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
TRAF4-202ENST00000262396 CKAP5Q14008 2032 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 FAM149AA5PLN7 773 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 TLR4O00206 839 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 ENC1O14682 589 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 DAB1O75553 588 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 TPM2P07951 284 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 PON1P27169 355 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 NUDT1P36639 197 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 GGCXP38435 758 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 PITX1P78337 314 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-202ENST00000262396 CENPCQ03188 943 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 DLG2Q15700 870 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 SETMARQ53H47 684 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-202ENST00000262396 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 DHRS13Q6UX07 377 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 ZDHHC17Q8IUH5 632 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 PTPRN2Q92932 1015 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 SLC2A13Q96QE2 648 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-202ENST00000262396 TKTL2Q9H0I9 626 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 PLCB1Q9NQ66 1216 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
TRAF4-202ENST00000262396 FAM170AA1A519 330 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 GTPBP10A4D1E9 387 aaKnown RBP12.58□□□□□ -0.4
TRAF4-202ENST00000262396 BECN2A8MW95 431 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 PLK4O00444 970 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 KPNA3O00505 521 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-202ENST00000262396 SLC7A4O43246 635 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 RTN2O75298 545 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 PAGE1O75459 146 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 ADCY5O95622 1261 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 F9P00740 461 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 IGLV3-25P01717 112 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 ERBB2P04626 1255 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 CDK4P11802 303 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 VAV1P15498 845 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 CDH4P55283 916 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 APBA1Q02410 837 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 HSP90AA4PQ58FG1 418 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 KCNT1Q5JUK3 1230 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 BRMS1LQ5PSV4 323 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 C6orf118Q5T5N4 469 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 FAM102AQ5T9C2 384 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-202ENST00000262396 DBX2Q6ZNG2 339 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 Q6ZVU0 165 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 SLC47A2Q86VL8 602 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 ERICH1Q86X53 443 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
TRAF4-202ENST00000262396 PIP4K2CQ8TBX8 421 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 HNRNPLLQ8WVV9 542 aaKnown RBP12.58□□□□□ -0.4
TRAF4-202ENST00000262396 SHC3Q92529 594 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 FEM1AQ9BSK4 669 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 SPON2Q9BUD6 331 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 TMEM51Q9NW97 253 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 DMTF1Q9Y222 760 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 RAXQ9Y2V3 346 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 HS3ST4Q9Y661 456 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 AK5Q9Y6K8 562 aa12.58□□□□□ -0.4
TRAF4-202ENST00000262396 TRABD2BA6NFA1 517 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 FOXN3O00409 490 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-202ENST00000262396 ALOX15BO15296 676 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 SRGAP2O75044 1071 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 RFPL3O75679 317 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 PCDH8O95206 1070 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 DNA2P51530 1060 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 PLK1P53350 603 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 CYP4F3Q08477 520 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 TAF3Q5VWG9 929 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 OLFML1Q6UWY5 402 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 SLC26A9Q7LBE3 791 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 MFSD2AQ8NA29 543 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 BAHD1Q8TBE0 780 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-202ENST00000262396 C18orf8Q96DM3 657 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 KLHDC7BQ96G42 594 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 PPP1R16AQ96I34 528 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 PRMT1Q99873 361 aaKnown RBP12.57□□□□□ -0.4
TRAF4-202ENST00000262396 MYOCQ99972 504 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 TUBGCP2Q9BSJ2 902 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 NDST4Q9H3R1 872 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 IGF2RP11717 2491 aa12.57□□□□□ -0.4
TRAF4-202ENST00000262396 FRYQ5TBA9 3013 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 PRAMEF26H0Y7S4 382 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 MCF2LO15068 1137 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 SLC31A1O15431 190 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 ATP9BO43861 1147 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 RNGTTO60942 597 aaKnown RBP12.56□□□□□ -0.4
TRAF4-202ENST00000262396 PRNPP04156 253 aa12.56□□□□□ -0.4
TRAF4-202ENST00000262396 WNT1P04628 370 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms