RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 APEX2Q9UBZ4 518 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 NCAM2O15394 837 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 MYL4P12829 197 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 RCVRNP35243 200 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 IL6STP40189 918 aaPredicted RBP10.83□□□□□ -0.68
KPNA3-201ENST00000261667 RFX5P48382 616 aaPredicted RBP10.83□□□□□ -0.68
KPNA3-201ENST00000261667 BCAR1P56945 870 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 BNIP2Q12982 314 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 ADGRE1Q14246 886 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 CDO1Q16878 200 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 GALNTL6Q49A17 601 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 AADACL2Q6P093 401 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 ART4Q93070 314 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 ARHGEF26Q96DR7 871 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 TMEM109Q9BVC6 243 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 MND1Q9BWT6 205 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 TEKT3Q9BXF9 490 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 SERHL2Q9H4I8 314 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 PRKAB2O43741 272 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 TSPAN19P0C672 248 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 FOXO4P98177 505 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 CLPPQ16740 277 aaPredicted RBP10.83□□□□□ -0.68
KPNA3-201ENST00000261667 TIMM50Q3ZCQ8 353 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 COLEC12Q5KU26 742 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 SGMS1Q86VZ5 419 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 SLC15A3Q8IY34 581 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 MPP5Q8N3R9 675 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 ZNF366Q8N895 744 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 ISCA1Q9BUE6 129 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 BFARQ9NZS9 450 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 NEDD4P46934 1319 aa10.83□□□□□ -0.68
KPNA3-201ENST00000261667 BCL9O00512 1426 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SYNJ2BP-COX16A0A087WUM0 186 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 A6NL46 340 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PIAS1O75925 651 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 RFX1P22670 979 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 AKAP5P24588 427 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 RRM2P31350 389 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PPP2R2BQ00005 443 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 GIT2Q14161 759 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 HSD17B12Q53GQ0 312 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SLC30A10Q6XR72 485 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 RCN3Q96D15 328 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 NSMCE2Q96MF7 247 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PANX3Q96QZ0 392 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SPOCK3Q9BQ16 436 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 ZNF556Q9HAH1 456 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 USP29Q9HBJ7 922 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 NGRNQ9NPE2 291 aaKnown RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 COX16Q9P0S2 106 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 IPO11Q9UI26 975 aaKnown RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 ARHGEF33A8MVX0 844 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 NR5A2O00482 541 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 HAT1O14929 419 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 KCNN4O15554 427 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 IFNA7P01567 189 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 RBP3P10745 1247 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 HNF4AP41235 474 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PSME3P61289 254 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SF3B4Q15427 424 aaKnown RBP eCLIP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 DDR2Q16832 855 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 FAM98CQ17RN3 349 aaKnown RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 FAM102BQ5T8I3 360 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 N4BP2L1Q5TBK1 243 aaPredicted RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 MICALL2Q8IY33 904 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SAMD14Q8IZD0 417 aaPredicted RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 UBE2J2Q8N2K1 259 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SLC17A7Q9P2U7 560 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 POU2F3Q9UKI9 436 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 CDH9Q9ULB4 789 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 MYMKA6NI61 221 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 BTBD19C9JJ37 291 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 UQCRC1P31930 480 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PRIM2P49643 509 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 TOB1P50616 345 aaPredicted RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 IGSF11Q5DX21 431 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 FAXCQ5TGI0 409 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PGBD2Q6P3X8 592 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 HAUS6Q7Z4H7 955 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 HIPK1Q86Z02 1210 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 HERC6Q8IVU3 1022 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 ALDH16A1Q8IZ83 802 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 LRRC47Q8N1G4 583 aaKnown RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 CADM2Q8N3J6 435 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 CBR4Q8N4T8 237 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.82□□□□□ -0.685e-12■■■■■ 38.9
KPNA3-201ENST00000261667 CCDC167Q9P0B6 97 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 FAM92AA1XBS5 289 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 RGSL1A5PLK6 1076 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 PLATP00750 562 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 SPRP35270 261 aaPredicted RBP10.82□□□□□ -0.68
KPNA3-201ENST00000261667 TRIM23P36406 574 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 STARP49675 285 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 RAD51Q06609 339 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 NIPAL4Q0D2K0 466 aa10.82□□□□□ -0.68
KPNA3-201ENST00000261667 NFYCQ13952 458 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms