RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SNX9Q9Y5X1 595 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 CEPT1Q9Y6K0 416 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 BPTFQ12830 3046 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 BOLA2-SMG1P6H3BVE0 249 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 MT-CO1P00395 513 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 PFKMP08237 780 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 GP5P40197 560 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 EFNA5P52803 228 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 SEMA5AQ13591 1074 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 PIGGQ5H8A4 983 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 ARL13AQ5H913 290 aaPredicted RBP16.24■□□□□ 0.19
LMNB1-201ENST00000261366 ITPRIPL1Q6GPH6 555 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 KRT80Q6KB66 452 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 XRRA1Q6P2D8 792 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 MFSD3Q96ES6 412 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 CSPG4P5Q96PW8 444 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 CIB1Q99828 191 aa16.24■□□□□ 0.19
LMNB1-201ENST00000261366 ILKAPQ9H0C8 392 aaPredicted RBP16.24■□□□□ 0.19
LMNB1-201ENST00000261366 ARHGEF37A1IGU5 675 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 G3V2L1 256 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 TMX2-CTNND1H3BSU7 103 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 MFSD11O43934 449 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 TRIM13O60858 407 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 SEC24DO94855 1032 aaPredicted RBP16.23■□□□□ 0.19
LMNB1-201ENST00000261366 VDRP11473 427 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 PGAM1P18669 254 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 ME2P23368 584 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 ETFBP38117 255 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 MAGEA6P43360 314 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 EMP3P54852 163 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 SEL1L3Q68CR1 1132 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 PPWD1Q96BP3 646 aaKnown RBP16.23■□□□□ 0.19
LMNB1-201ENST00000261366 OMDQ99983 421 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 TMEM79Q9BSE2 394 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 GGA3Q9NZ52 723 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 UBP1Q9NZI7 540 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 ZDHHC2Q9UIJ5 367 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 STAG3L1P0CL83 205 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 GARSP41250 739 aaKnown RBP16.23■□□□□ 0.19
LMNB1-201ENST00000261366 GRIA4P48058 902 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 NR1H2P55055 460 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 ZNF460Q14592 562 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 C16orf72Q14CZ0 275 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 OLFML1Q6UWY5 402 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 GK5Q6ZS86 529 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 PID1Q7Z2X4 250 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 TTC30AQ86WT1 665 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 PLEKHG4BQ96PX9 1271 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 GCOM2Q9BZD3 368 aaPredicted RBP16.23■□□□□ 0.19
LMNB1-201ENST00000261366 FAM96AQ9H5X1 160 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 ACAD9Q9H845 621 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 NMRAL1Q9HBL8 299 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 GBA2Q9HCG7 927 aaPredicted RBP16.23■□□□□ 0.19
LMNB1-201ENST00000261366 HESX1Q9UBX0 185 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 RNF11Q9Y3C5 154 aa16.23■□□□□ 0.19
LMNB1-201ENST00000261366 CROCCQ5TZA2 2017 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 PLOD2O00469 737 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 MAFO75444 373 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 C2P06681 752 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 POLBP06746 335 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 ALOX15P16050 662 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 GLDCP23378 1020 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 MAGEA10P43363 369 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 ZNF280AP59817 542 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 LPIN1Q14693 890 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 NCBP2-AS2Q69YL0 99 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 P2RY11Q96G91 374 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 ZNF670Q9BS34 389 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 ZNF696Q9H7X3 374 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 RSL24D1Q9UHA3 163 aaKnown RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 RGPD3A6NKT7 1758 aaPredicted RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 RGPD4Q7Z3J3 1758 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 A0A0A0MRY4 1105 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 B4GALT4O60513 344 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 ALDH1A2O94788 518 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 VAPBO95292 243 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 ACAT1P24752 427 aaKnown RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 ADORA2BP29275 332 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 PTK2BQ14289 1009 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 SURF1Q15526 300 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 MTX3Q5HYI7 312 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 NUP93Q8N1F7 819 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 KHSRPQ92945 711 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 SPATA13Q96N96 652 aa16.22■□□□□ 0.19
LMNB1-201ENST00000261366 QKIQ96PU8 341 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 NIFKQ9BYG3 293 aaKnown RBP16.22■□□□□ 0.19
LMNB1-201ENST00000261366 KCNU1A8MYU2 1149 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 CKMT2P17540 419 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 SOX11P35716 441 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 ENTPD1P49961 510 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 TARBP2Q15633 366 aaKnown RBP16.21■□□□□ 0.19
LMNB1-201ENST00000261366 ADCY4Q8NFM4 1077 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 FAM110BQ8TC76 370 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 SLC29A1Q99808 456 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 GMPR2Q9P2T1 348 aaKnown RBP16.21■□□□□ 0.19
LMNB1-201ENST00000261366 GABBR2O75899 941 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 IMPDH2P12268 514 aa16.21■□□□□ 0.19
LMNB1-201ENST00000261366 TFEBP19484 476 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms