RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SCN1AP35498 2009 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 NUP205Q92621 2012 aa13.79□□□□□ -0.2
VHL-201ENST00000256474 YJEFN3A6XGL0 299 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 LIN7AO14910 233 aaPredicted RBP13.78□□□□□ -0.2
VHL-201ENST00000256474 NR2C2P49116 596 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 SLC26A2P50443 739 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 RAP1GDS1P52306 607 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 KLF10Q13118 480 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 GRM3Q14832 879 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 CNGA3Q16281 694 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 SLC26A9Q7LBE3 791 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 ARCQ7LC44 396 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 ANKRD27Q96NW4 1050 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 NDNQ99608 321 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 KLHL4Q9C0H6 718 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 RNF181Q9P0P0 153 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 PHIPQ8WWQ0 1821 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 ATP6AP2A0A1C7CYW4 349 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 ASB14A6NK59 587 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 BIRC5O15392 142 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 ATP6AP2O75787 350 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 CCNFP41002 786 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 GRIA4P48058 902 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 SLC12A2P55011 1212 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 CCNIQ14094 377 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 NRF1Q16656 503 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 NOTUMQ6P988 496 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 OSTM1Q86WC4 334 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 MYLK4Q86YV6 388 aaPredicted RBP13.78□□□□□ -0.2
VHL-201ENST00000256474 LPPQ93052 612 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 PHF21BQ96EK2 531 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 VPS39Q96JC1 886 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 LRRC40Q9H9A6 602 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 DTNAQ9Y4J8 743 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 C9JVG2 144 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 TAF6P49848 677 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 MPP1Q00013 466 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 BEX3Q00994 111 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 FSCBQ5H9T9 825 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 NOMO2Q5JPE7 1267 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 PAOXQ6QHF9 649 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 FTHL17Q9BXU8 183 aa13.78□□□□□ -0.2
VHL-201ENST00000256474 ILKAPQ9H0C8 392 aaPredicted RBP13.78□□□□□ -0.2
VHL-201ENST00000256474 SUDS3Q9H7L9 328 aaPredicted RBP13.78□□□□□ -0.2
VHL-201ENST00000256474 PDE4DIPQ5VU43 2346 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 TRIM13O60858 407 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 JUNP05412 331 aaKnown RBP13.77□□□□□ -0.2
VHL-201ENST00000256474 HDCP19113 662 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 GRM5P41594 1212 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 AFF1P51825 1210 aaKnown RBP13.77□□□□□ -0.2
VHL-201ENST00000256474 CCNA1P78396 465 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 ARL13AQ5H913 290 aaPredicted RBP13.77□□□□□ -0.2
VHL-201ENST00000256474 CYP2R1Q6VVX0 501 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 SATL1Q86VE3 508 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 ACE2Q9BYF1 805 aaPredicted RBP13.77□□□□□ -0.2
VHL-201ENST00000256474 FZD10Q9ULW2 581 aa13.77□□□□□ -0.2
VHL-201ENST00000256474 BUD23O43709 281 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 SERPINB8P50452 374 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 ANKRD20A4Q4UJ75 823 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 SH3D19Q5HYK7 790 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 ANKRD13AQ8IZ07 590 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 PPWD1Q96BP3 646 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 DNAJC1Q96KC8 554 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 MORF4L1Q9UBU8 362 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 RPL26L1Q9UNX3 145 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 CDY2AQ9Y6F7 541 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 CDY1Q9Y6F8 540 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 MYL3P08590 195 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 GRK2P25098 689 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 PTPN3P26045 913 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 CPOXP36551 454 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 SATB1Q01826 763 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 RNF111Q6ZNA4 994 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 MARK2Q7KZI7 788 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 LDB1Q86U70 411 aaPredicted RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 SLC10A4Q96EP9 437 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 ELMO2Q96JJ3 720 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 TNIP3Q96KP6 325 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 TKTL2Q9H0I9 626 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 ANLNQ9NQW6 1124 aa13.77□□□□□ -0.21
VHL-201ENST00000256474 DDX18Q9NVP1 670 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 UBQLN1Q9UMX0 589 aaKnown RBP13.77□□□□□ -0.21
VHL-201ENST00000256474 GSRP00390 522 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 YBX3P16989 372 aaKnown RBP eCLIP13.76□□□□□ -0.217e-8■□□□□ 9.6
VHL-201ENST00000256474 ZBTB17Q13105 803 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 LBRQ14739 615 aaKnown RBP13.76□□□□□ -0.21
VHL-201ENST00000256474 SLC25A52Q3SY17 297 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 SEL1L3Q68CR1 1132 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 TMC7Q7Z402 723 aa13.76□□□□□ -0.21
VHL-201ENST00000256474 NPWQ8N729 165 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms