RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 PDCD6IPQ8WUM4 868 aaKnown RBP11.89□□□□□ -0.51
VRTN-201ENST00000256362 GCOM2Q9BZD3 368 aaPredicted RBP11.89□□□□□ -0.51
VRTN-201ENST00000256362 CCDC90BQ9GZT6 254 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 WDR41Q9HAD4 459 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 PCDH12Q9NPG4 1184 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 TMEM216Q9P0N5 145 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 MYRFQ9Y2G1 1151 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 PSMD12O00232 456 aaPredicted RBP11.89□□□□□ -0.51
VRTN-201ENST00000256362 CHRNGP07510 517 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 THRAP10827 490 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 SLC18A2Q05940 514 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 POU5F1BQ06416 359 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 TFDP2Q14188 446 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
VRTN-201ENST00000256362 PMF1Q6P1K2 205 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 DSELQ8IZU8 1212 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 CYP4F12Q9HCS2 524 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
VRTN-201ENST00000256362 CNTN3Q9P232 1028 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 PAK5Q9P286 719 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 PCDHGC3Q9UN70 934 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 SNX9Q9Y5X1 595 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 DGKBQ9Y6T7 804 aa11.89□□□□□ -0.51
VRTN-201ENST00000256362 HMX2A2RU54 273 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SDR42E2A6NKP2 422 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PDLIM1O00151 329 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 NDUFB5O43674 189 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 ZBTB14O43829 449 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 KCNH1O95259 989 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 S100BP04271 92 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 FAM163BP0C2L3 166 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 CCDC130P13994 396 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 HDCP19113 662 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SDC4P31431 198 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 GPD2P43304 727 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 ZNF143P52747 638 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 RABGGTBP53611 331 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 NR1D2Q14995 579 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PLCL1Q15111 1095 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 IL23RQ5VWK5 629 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 TMEM214Q6NUQ4 689 aaKnown RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 GADL1Q6ZQY3 521 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 ADGRF2Q8IZF7 708 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SMYD1Q8NB12 490 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 AGBL3Q8NEM8 1001 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 RIN3Q8TB24 985 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 FAM149B1Q96BN6 582 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 CNPY3Q9BT09 278 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 ADNPQ9H2P0 1102 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SOX17Q9H6I2 414 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 TASP1Q9H6P5 420 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 CCDC167Q9P0B6 97 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 HES2Q9Y543 173 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SF3B1O75533 1304 aaKnown RBP eCLIP11.88□□□□□ -0.51
VRTN-201ENST00000256362 A0A087WZ62 844 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 GMNNO75496 209 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PIGRP01833 764 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SERPINE1P05121 402 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 CDH2P19022 906 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 UGT1A6P19224 532 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 CYP2F1P24903 491 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 WASHC5Q12768 1159 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SLC10A2Q12908 348 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 CCDC14Q49A88 953 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PPP1R26Q5T8A7 1209 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 TMEM53Q6P2H8 277 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 ZPBP2Q6X784 338 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SH2D5Q6ZV89 423 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 ZNF410Q86VK4 478 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 FAM131BQ86XD5 332 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 NUP93Q8N1F7 819 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 FNDC8Q8TC99 324 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SEPT1Q8WYJ6 367 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SPATA33Q96N06 139 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 FDXACB1Q9BRP7 624 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 POLR1BQ9H9Y6 1135 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PLGRKTQ9HBL7 147 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PCDH18Q9HCL0 1135 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 SSU72Q9NP77 194 aaKnown RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 SLC39A10Q9ULF5 831 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 AP4E1Q9UPM8 1137 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 TOR1BO14657 336 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PPEF2O14830 753 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 MAFO75444 373 aaPredicted RBP11.88□□□□□ -0.51
VRTN-201ENST00000256362 COL6A2P12110 1019 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 MGAT1P26572 445 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PIK3R1P27986 724 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 CPOXP36551 454 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 GJA8P48165 433 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 CD300CQ08708 224 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 FKBP1CQ5VVH2 108 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 PRR23BQ6ZRT6 265 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
VRTN-201ENST00000256362 TP53INP2Q8IXH6 220 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms