RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 FAM153BP0C7A2 387 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 HNRNPH1P31943 449 aaKnown RBP19.29■□□□□ 0.68
PTPRE-201ENST00000254667 DEFB115Q30KQ5 88 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 FAM153CQ494X1 144 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 DUSP28Q4G0W2 176 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 FNDC5Q8NAU1 212 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 NKX2-3Q8TAU0 364 aa19.29■□□□□ 0.68
PTPRE-201ENST00000254667 TNFSF9P41273 254 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 IL2P60568 153 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 SETMARQ53H47 684 aaPredicted RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 C16orf59Q7L2K0 433 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 NKAPQ8N5F7 415 aaKnown RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 MRPL48Q96GC5 212 aaKnown RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 PURBQ96QR8 312 aaKnown RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 PPM1AP35813 382 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 CCT8P50990 548 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 ITGB3BPQ13352 177 aaPredicted RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 BBS12Q6ZW61 710 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 ANKRD23Q86SG2 305 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 HELQQ8TDG4 1101 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 CATSPER2Q96P56 530 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 FAM126AQ9BYI3 521 aaPredicted RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 TMEM245Q9H330 911 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 HES2Q9Y543 173 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 FKTNO75072 461 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 MRPL28Q13084 256 aaKnown RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 TRIM60Q495X7 471 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 DEFB107AQ8IZN7 70 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 ASAH2Q9NR71 780 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 ACTL7BQ9Y614 415 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 FCHO1O14526 889 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 RGS14O43566 566 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 FGFR1P11362 822 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 FUT2Q10981 343 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 FAM98BQ52LJ0 330 aaKnown RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 ZCCHC8Q6NZY4 707 aaKnown RBP19.28■□□□□ 0.68
PTPRE-201ENST00000254667 ABHD15Q6UXT9 468 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 MIER2Q8N344 545 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 KLHL4Q9C0H6 718 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 CNGB3Q9NQW8 809 aa19.28■□□□□ 0.68
PTPRE-201ENST00000254667 OR6C75A6NL08 312 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 ABHD2P08910 425 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 PSMB4P28070 264 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 FASTKQ14296 549 aaKnown RBP19.27■□□□□ 0.68
PTPRE-201ENST00000254667 CYP2A13Q16696 494 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 FAM110CQ1W6H9 321 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 WASHC2DQ5SRD0 308 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 FBXL19Q6PCT2 694 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 CES3Q6UWW8 571 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 DLGAP2Q9P1A6 1054 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 NR2E3Q9Y5X4 410 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 FAM47E-STBD1D6RA91 191 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 ATP6V1B2P21281 511 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 CENPAP49450 140 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 SLC16A1P53985 500 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 SKP1P63208 163 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 CCDC81Q6ZN84 652 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 OR5B17Q8NGF7 314 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 ZNF75CPQ92670 426 aaPredicted RBP19.27■□□□□ 0.68
PTPRE-201ENST00000254667 OPTCQ9UBM4 332 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 MORF4L1Q9UBU8 362 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 PCDHA11Q9Y5I1 949 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 TYMPP19971 482 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 FMO4P31512 558 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 RFX3P48380 749 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 DRG2P55039 364 aaKnown RBP19.27■□□□□ 0.68
PTPRE-201ENST00000254667 SMARCB1Q12824 385 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 GPSM1Q86YR5 675 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 NSMCE2Q96MF7 247 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 MMADHCQ9H3L0 296 aaPredicted RBP19.27■□□□□ 0.68
PTPRE-201ENST00000254667 SLC24A3Q9HC58 644 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 PIH1D1Q9NWS0 290 aaKnown RBP19.27■□□□□ 0.68
PTPRE-201ENST00000254667 DDX20Q9UHI6 824 aaKnown RBP19.27■□□□□ 0.68
PTPRE-201ENST00000254667 ZNF112Q9UJU3 913 aa19.27■□□□□ 0.68
PTPRE-201ENST00000254667 CATP04040 527 aaKnown RBP19.27■□□□□ 0.67
PTPRE-201ENST00000254667 KRT20P35900 424 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 RAP1GAP2Q684P5 730 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 BMP6P22004 513 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 PAGE2BQ5JRK9 111 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 ZNF614Q8N883 585 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 TERB1Q8NA31 727 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 RAD21L1Q9H4I0 556 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 EPS8L2Q9H6S3 715 aa19.27■□□□□ 0.67
PTPRE-201ENST00000254667 KPNA5O15131 536 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 SEC22BO75396 215 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 PRKAR2AP13861 404 aaKnown RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 CES1P23141 567 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 MATKP42679 507 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 UGCGQ16739 394 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 STAG3L4Q8TBR4 150 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 TNFRSF25Q93038 417 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 SLC25A23Q9BV35 468 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 MLPHQ9BV36 600 aaPredicted RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 POMKQ9H5K3 350 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 DDX28Q9NUL7 540 aaKnown RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 SH3BP4Q9P0V3 963 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 TGFB1I1O43294 461 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 KIF1CO43896 1103 aaKnown RBP19.26■□□□□ 0.67
PTPRE-201ENST00000254667 FASP25445 335 aa19.26■□□□□ 0.67
PTPRE-201ENST00000254667 CLCN5P51795 746 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms